Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03218 ATGGCGGGAAAAGTGTCGAAGGCAGCATTCGATGCGAAGATGTGGAAGCTCTTGAAGGAGTACAGCCAGGTGGTGGTGGTTACCACCGATAACGTTGGTTCCAACCAAATCAATGGCATACGGAGGAGTTTAAAGGGCGACTCCATTGTCGTTATGGGGAAGAACTCCATGATGAGGCGCTCCTTCACGCTTCAAGCTGGAAACAATTCCTTCCTCAACCTTACTCCTCTTCTTAGGGGAAATGTAGCGTTGATTTTCACCAAAGGAGATATGAAGGAGGTTAGCGACGGGGTTGCTAAGTTGAAGGTTGTTAATCCTCTTCTCATGTGCTCCAAATACTTGTCATATGAATCGTACCGCAATTGTTCTTACATGCAATCTGGACAGTTGCCTTTGGGCCTCAAGTGTTGTAACCAGCAGTTGTTGCAGGATTCTGAACCTTTTTTGGTATGCTCAAAATTCACGCCGCACCAGCATTGTTTAATGACGAGATCAAGACAGCTCTTGGCGATGAGTGTATGGTCTCCTCTTCTCCTTTTGGCTGGTAACTTGTGA 555 0.4649 MAGKVSKAAFDAKMWKLLKEYSQVVVVTTDNVGSNQINGIRRSLKGDSIVVMGKNSMMRRSFTLQAGNNSFLNLTPLLRGNVALIFTKGDMKEVSDGVAKLKVVNPLLMCSKYLSYESYRNCSYMQSGQLPLGLKCCNQQLLQDSEPFLVCSKFTPHQHCLMTRSRQLLAMSVWSPLLLLAGNL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03218 184 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 183 - -
Aip08g03218 184 Pfam Ribosomal protein L10 6 99 IPR001790 -
Aip08g03218 184 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 183 - -
Aip08g03218 184 Gene3D - 4 116 IPR043141 -
Aip08g03218 184 SUPERFAMILY Ribosomal protein L10-like 7 101 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03218 Aip-Chr8 122928531 122930328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03218 1 106 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 57.522 2.47e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03218 K02941 - twl:120015003 132.494