Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03212 ATGATTCGGTTTTTGTCATTGGCATGTGGGTCCCCCCTATTATGCACTCAACCAACAACCATATACCTCAGCATAATATTTGACTCAAACTGGCGAAATCCTGATGTGGAAGGGGAAGCATTGATTGAATTTCTGAGGGCCCTCAATGATTCCAATAATCAAATTAAAGATTGGAATAGTTTTTTTGTGAGCCCCTGCTACAGTTGGTCTAATGTTGATTGTAGCAACAAACATGTTATATCTCTGAACTTGGCATCAAAAGGATTTTCTGGAACACTTTCTCCCTCAATTGCCAAATTGAAATACTTGGTTAGCTTGGAGTTGCAGGACAACAATCTTGCAGGCCCTTTACCTGACTACATCGCCAACTTAACGCGCCTCGAATATCTTAATCTTGCTGACAATAATTTCAGTGGTTCTGTCCCGGCTACTTGGGGCCGACTTTCGAGTCTAAAGCATCTGTTGTTGAAAGGGAATGACTTATCTGGACATATTCCAGATACAATTGCAAACCTTACTGGATTGGCAGAATTGGATCTTTCATCTAATGGTCTTACTGGAACTGTCCCAATACCACTCTTTTCAATTCCAATATTTAATTTTTCGAACACACTTCTTCGTTGTGGCTCTAGCTTGGATCAGCCTTGTGCTTCTAAACCTTCACTTCCTGGTTCAACCAACAAACCAAAACTTGTAAAGATTGTTGGTTTTGCAAGTTGTGGTTTATTTGCACTGATAATTCTTGGGGCTATCTTTGTATATAGATACCATCACATGCACAGACATAAAACTGATGTCTTTTTTGATGTTTCAGGTGAAGATGAGAGCCAAATTTCCTTTTGGCAACTGAGAAGATTTTCATGGCGTGAACTGCAACACGCGACTAAAAATTTCAGCAAAAGCAATGTAATTGGCACAGGAGGATTTGGAAAAGTATATAAAGGAGTACTCTCAGATGGCACAAAAGTGGCTGTGAAACGCCTCGCCGATTATCAGGCTCCTGGTGGAGAAGCTGCATTCCAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAAGAATCTGCTAAGATTAATTGGATACTGTACAACCTCAACTGAAAGAATCCTAGTGTACCCTTTCATGGAAAATAGAAGTGTAGCATATCAATTGAGAGATTTAAAAGAAGGTGAGAAAGGTTTAGACTGGGCAATGAGGAAAAATGTGGCATTTGGCACAGCACATGGATTAGATTATTTACATAATCAATGCAACCCTAAGATAATTCACCGTGATTTGAAAGCCGCAAATATTTTATTAGATGATAACTTTGAAGCTGTTCTTGGAGACTTTGGTCTAGCTAAACTTGTTGATACAAGGGTGACTCATGTTACTACTCAAGTGAGAGGCACAATGGGTCATATAGCACCTGAATACTTGTGCACCGGAAAATCATCAGAGAAGACTGATGTGTTTGGATATGGTATAACACTTCTTGAATTGGTCACCGGTCAACGCGCCGTTGACTTGTTTCGGCTTCAAGAGGAGGAGGAAGATGTTCTTCTGCTTGATCATATAAAAAAACTATTGAAGGAAGACAGGGTGAAGGACATAGTAGATAGAAACCTAGAGACATATGATTCAGAGGAAGTAGAGAGAATAATTCATGTTGCATTGCTTTGCACAAGAAACTACCCAGAGGAACGTCCAACAATGTCAGAGATAGTGAAAATGCTTCAAGGAGTGGGTTTGCAAGAGAGATGGAATGAATTGGAGCAACATAATAATGAAGAAGAGAGAAAATGCATGCATTGTGGTTTCTGA 1803 0.396 MIRFLSLACGSPLLCTQPTTIYLSIIFDSNWRNPDVEGEALIEFLRALNDSNNQIKDWNSFFVSPCYSWSNVDCSNKHVISLNLASKGFSGTLSPSIAKLKYLVSLELQDNNLAGPLPDYIANLTRLEYLNLADNNFSGSVPATWGRLSSLKHLLLKGNDLSGHIPDTIANLTGLAELDLSSNGLTGTVPIPLFSIPIFNFSNTLLRCGSSLDQPCASKPSLPGSTNKPKLVKIVGFASCGLFALIILGAIFVYRYHHMHRHKTDVFFDVSGEDESQISFWQLRRFSWRELQHATKNFSKSNVIGTGGFGKVYKGVLSDGTKVAVKRLADYQAPGGEAAFQREVQLISVAVHKNLLRLIGYCTTSTERILVYPFMENRSVAYQLRDLKEGEKGLDWAMRKNVAFGTAHGLDYLHNQCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTRVTHVTTQVRGTMGHIAPEYLCTGKSSEKTDVFGYGITLLELVTGQRAVDLFRLQEEEEDVLLLDHIKKLLKEDRVKDIVDRNLETYDSEEVERIIHVALLCTRNYPEERPTMSEIVKMLQGVGLQERWNELEQHNNEEERKCMHCGF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03212 600 SUPERFAMILY Protein kinase-like (PK-like) 276 573 IPR011009 -
Aip08g03212 600 ProSiteProfiles Protein kinase domain profile. 298 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03212 600 PANTHER LRR RECEPTOR-LIKE KINASE 33 595 - -
Aip08g03212 600 Gene3D Transferase(Phosphotransferase) domain 1 375 591 - -
Aip08g03212 600 Gene3D Ribonuclease Inhibitor 144 197 IPR032675 -
Aip08g03212 600 Gene3D Ribonuclease Inhibitor 36 143 IPR032675 -
Aip08g03212 600 Pfam Protein kinase domain 299 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03212 600 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Aip08g03212 600 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Aip08g03212 600 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03212 600 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 33 595 - -
Aip08g03212 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Aip08g03212 600 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Aip08g03212 600 Pfam Leucine rich repeat 103 161 IPR001611 GO:0005515
Aip08g03212 600 SUPERFAMILY L domain-like 37 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03212 Aip-Chr8 122867261 122871816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03212 21 591 Receptor kinase-like Gene Family AT5G65240 56.724 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip08g03212 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03212 - - adu:107463312 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03212 08 122867261 122871816 Aip08g03212 08 122867261 122871816 ECH