Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03209 ATGATGATATACGAATTTCTAGAGCTTCAAAGTAGCCCTCCATCTCCATCGTCTTCATCTTCTCAACACCAGCAGGCAGTAGCCTTCCATCTTCGCGTGGTCATCAACACCATCTCATCGTCTTCATCGTCGCGCGGTCCTCAACAGTCAACACCAGAAGCCTTCCATCGACCCCAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATTAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGTACTCTTTTTGAGCTGCATGATGACAACTATGTGCTAAAGGCAATGAAGTTCTGTGGGAGACCACAGAGTGATAGTGAAATTGATGCTGATTTATATCAAAGTGGCGGTGGTAGTAGTGGTCTTTATGCTGCATCTCTTATTCTTCTGCTCAACAGGGTGTGA 411 0.4453 MMIYEFLELQSSPPSPSSSSSQHQQAVAFHLRVVINTISSSSSSRGPQQSTPEAFHRPQTRPHATVEVEILEDMQLVHFDFNSTLFELHDDNYVLKAMKFCGRPQSDSEIDADLYQSGGGSSGLYAASLILLLNRV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03209 136 Pfam Transcription factor DP 59 111 IPR014889 -
Aip08g03209 136 MobiDBLite consensus disorder prediction 39 62 - -
Aip08g03209 136 SMART DP_2 19 127 IPR014889 -
Aip08g03209 136 Gene3D Transcription factor DP 19 117 IPR038168 -
Aip08g03209 136 PANTHER TRANSCRIPTION FACTOR DP 24 110 IPR015648 GO:0005667|GO:0051726
Aip08g03209 136 SUPERFAMILY E2F-DP heterodimerization region 59 116 IPR037241 -
Aip08g03209 136 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03209 Aip-Chr8 122831929 122835462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03209 19 99 E2F-DP Transcription Factor Family AT5G02470 43.820 3.14e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03209 K04683 - aip:107612328 161.384