Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03208 ATGCAAGAGGATCAAAATAAGAAGATGAAAGTGAAGAAGGGTTGGCTTGCGGTTCAAGTTGGATTAGAAGATGAAAGTGAAGAAGGTTCAACACCTCAAAGATTTGTCATACCTATTTCATACCTTTACCATCCATTATTTAAGAGACTCCTAGACAAAGCTTATGAGGTTTATGGCTATCATACCGATGGTCCACTCAAGCTACCGTGTTCCGTCGACGACTTCCTTCATCTACGGTGGCGAATCGAGAAAGAATCTAATCATCATGGTGCTGCTAGTCACCATAACAACCATCATAGCCACCATAATCATCATCGCCTTCCTCATGCTTTGTATAATTTTCACTCTTGTTAA 354 0.404 MQEDQNKKMKVKKGWLAVQVGLEDESEEGSTPQRFVIPISYLYHPLFKRLLDKAYEVYGYHTDGPLKLPCSVDDFLHLRWRIEKESNHHGAASHHNNHHSHHNHHRLPHALYNFHSC 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03208 117 Pfam Auxin responsive protein 6 81 IPR003676 GO:0009733
Aip08g03208 117 PANTHER SMALL AUXIN-UP RNA-RELATED 9 93 - -
Aip08g03208 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03208 Aip-Chr8 122812752 122813424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03208 11 83 Calmodulin-binding Proteins AT3G43120 46.575 3.75e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03208 K14488 - gmx:100809305 172.555