Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03201 atggggaaacatattgtaattcaggaatctcaaaatgatcctagcaagcgtagcaggttgcggggttacgaggacatcaatcttgttcttactcaaaacaagGGAACTGAAGCAAGTAGCATCATTTTACACGAATGGGATTGCTATGGAAAACCAGGTTTAGTACATTGGAGAGATTTAACTTTTTCAGATATATGTCAGCTAAAGCTCCTCATTTTAGATGGCGTGGAAGCTCCAATTCTTAGATATATTCCTTGTTCATTGAGAGTTTTGCGCTGGAGACGTTGTCCAATGGAAACTCTGCCCTTTATGGATCAAGGCTTTGAGCTAGTTGAAATTAATCTGTCTGATAGCTCCAGCATTATACAAGTATGGCATGGAAAAAAGTTTCTGGAAAAGCTGAAGTACTTATCTCTGAAGTACTTATATCGGCTGAAACAAATTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTTGACGTTGAAGATTGTTATGAACTGGGTGATTTTCCCTCGTATCTCACACTTCACAAGAGCCTTGTTAAACTTAGTTTACGTAATTCCTCAAGTCTTGAAACTCTTGGGAGTAAATTGGAGATGAGTTCCCTCAAGGAATTACGTCTTGATGACTGCACAAGTATGAGGAAACTTGCAGAATTTGGAGAATGCATGAAACATTTATCAGTTCTTTCTTTGTCGTATACAGCCATCGAAGAACTACCCACAACGGTTGGCTGTTTAGTTGGCCTAAAGGAGTTGCACTTAAGATGTTGTGAAAGGCTTGCTTGCCTTCCAGACAGCATTCAAAAGTTAAAATCCCTCATATTTTTTAATCTTTCTGGCTGCCTAAATGTCCTTCAATCTTTGCATTCTCTATCTGGTCTGACCTCATTGGATACCCTGATATTATCGGGGTGTTTTGTCACATCTCAAGAGTCGTGGTCTTACAATCTTGGCAACTTAGTGTCTTTGACGAATTTGTATTTATCAAAGAACAAGTTTGTAAGGGTTCCAATAAATATCCATGAACTCCCCAGGCTTAGATGTCTATATCTAGACCGCTGCCCTAATCTGAAGGTTTTACCAGAGCTTCCGTCAAGTATAAGAGAGCTAAATGCACGAGATTCTGCATCACTGGATACATGGCATTTGAATGTGATATCAAAGGTGTGTTGTGGCTTTGCAGCATCAGCTAACCATCATTCTGATGGGCTCTTGCAAATGTGGCTCGCACAGAATGAAGAGGAGAAAATTCCATTGTGGTTTGTCCATAAGGAACTGGGTAATGGAGTATCAATCACATTGCCACATAATGAAACCATGGCACTTGCTCTCTGTTTCCGATTATGCCCAACGGAGACTCGTCCTAATCTTGGGGCAAAATTGTCGGTGATGTGCAACGGTAAGGAATTCATTAAAAAGCATTTAACTGCAGCGCGTGAAACTAAAAATTCTCAGCATTTCATCCTTTGCTTGAGCAGTGACTATTTTGTTGACCAATTTTGCCAACCCTATCGCTTTCAACTGGTATTGCCTTTGTACCTTGAAATGAAAGTGGAGAGTTCTGGGGCTCGGTGGGTGTACAAGCAAGACATCCAAGATTTGAAGAAAAGTGGAACCCAAACATAA 1632 0.3787 MGKHIVIQESQNDPSKRSRLRGYEDINLVLTQNKGTEASSIILHEWDCYGKPGLVHWRDLTFSDICQLKLLILDGVEAPILRYIPCSLRVLRWRRCPMETLPFMDQGFELVEINLSDSSSIIQVWHGKKFLEKLKYLSLKYLYRLKQIPDLSEAPNLEILDVEDCYELGDFPSYLTLHKSLVKLSLRNSSSLETLGSKLEMSSLKELRLDDCTSMRKLAEFGECMKHLSVLSLSYTAIEELPTTVGCLVGLKELHLRCCERLACLPDSIQKLKSLIFFNLSGCLNVLQSLHSLSGLTSLDTLILSGCFVTSQESWSYNLGNLVSLTNLYLSKNKFVRVPINIHELPRLRCLYLDRCPNLKVLPELPSSIRELNARDSASLDTWHLNVISKVCCGFAASANHHSDGLLQMWLAQNEEEKIPLWFVHKELGNGVSITLPHNETMALALCFRLCPTETRPNLGAKLSVMCNGKEFIKKHLTAARETKNSQHFILCLSSDYFVDQFCQPYRFQLVLPLYLEMKVESSGARWVYKQDIQDLKKSGTQT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03201 543 Gene3D Ribonuclease Inhibitor 54 221 IPR032675 -
Aip08g03201 543 Gene3D Ribonuclease Inhibitor 222 393 IPR032675 -
Aip08g03201 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 251 383 IPR044974 GO:0006952
Aip08g03201 543 SUPERFAMILY L domain-like 82 366 - -
Aip08g03201 543 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 251 383 - -
Aip08g03201 543 Pfam C-JID domain 416 533 IPR045344 -
Aip08g03201 543 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 272 - -
Aip08g03201 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 272 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03201 Aip-Chr8 122742538 122744438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03201 2 286 WRKY Transcription Factor Family AT4G12020 36.066 5.51e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03201 - - ahf:112769348 1085.09