Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03196 ATGGAAGAAGGGAAGGGAAGAAGCGAGAGCGGTCCAAATCCAAGAGTTAACGGTACTAGTTTCTCTATTAACGATCCGGAAAATCAAAGAGCAAAGAAATTGTGGACAGTTGATAATGTGAAGGCAATGCGGTTCAAATCGTTAGCGGCTGCGAAATCATTCTACAGGTTGTATGCTGCGGCCACAGGGTTTGAGGTTCAAAAGCAAGGCAGTTTTCGGGGCGTGGGCGGTCAAGTCATCATGAGAAGATGGGTTTGTAACAGAGGAGGTTGTTGTAAGAAGAAGAAGAATCTAGAAAAGGCTAAGCACTCAATTCGAGCCGATTGTCCTGCTGCGTTCTGCGTTAGCTTGGGCTATGCTAGTCGCAGGTGGTTGGTAAGGGAGTTTGTGGCCGAGCATACACACGAGTTGGGATTCAAATTATTCCCCCAAATTTATCAACCTATTGAAGTAGAAGATTATTTAACAAGTCTAAAGGATTCAAGCACTTCCTACAGATCTTATATCACAATTGAGGATGCAGAAGCTGCAATTTCTTATTTAACAGAGAAGAAGGATTCAGAGCCTCGGCTTTTCTATGAAGTAAACTATGTCAATGCTAGTTTAGCTCGGATTTTCTTTGCAGACTCTATGGCTCAGTTGGATTGTTCATGCTTTGGGGACGTGGTTGCAGTTTATAGGACTAATTCAAGTGATCTGCACTTTGTCATATTGTTTAGTCTCAACCATCATCATCAAACAACTATACTTGGATGCGCAATCCTCGGCGAAGAAACTGTTGAGGCATACACATGGATGTTTCAAAAATTTCTTGATCTAATGCAGGGTTGCATGCCATTATCTATTGTGACTGATGGTAACAAAGCTTTAGGTGAAGCTATTAAGTCTGTGTTGCCAGAATCACGCCATCGCCTATGTACATGGCATCTTGAGAAAATTGCTTCTTCTATTGTTGATAATCCATCCTTTCTAGCTGATTTCAAAGCGTTGATGCTGGATTTTCTTTCGCTGAATGATTTTGAGCTGAAATGGAAGGCAATGGTTGATAATTACAAATTATCTGAAAATCCATGGATACTGGAGATGTATAGGAAACGTCATGAGTGGGCAGAGACTTATTTGAGGGGACATTTCTGGGCCGGACTGCGAAGCACAAAAGTATGCCAAGTTCTTGATGGAAATCTGAGCAGGCTTTCACTACATGAACTAAAACTCAATCAAGTTCTCAGTCTGTATGACAGTGTTGTTATGAAAATCCGGATCAACGAGGGGAAGGCTGATTATGATTCTAAATATTCAAAATTCGCTCCCTCAACCTCTCTTGTGAAAATGGAGAAACAGGCTTTTGATATATTTACAAGAGAGTCTTATCAAAGGTTTCTTTCAGAGATGCAGATGGAGATGCATCTGGTTGCTTTAGAAATAGATTATGATGATCCACCCTGCCGCAAATATAAATTGGCGAAAATTGATCATGAGGACTTAGCATATGAAGTTATGTTCAATCCTTGTGGTCTAACTATTGAATGCTCATGCTTGAAGTTTGAGACATTTGGATTCCCTTGCAGTCATATCTTTCATGTATTGAAATCTGAGGGATTCAAAGACGTACCTCATAATCTCATGCACCAAAGATGGACAAAATCAGCAAAGTCAACAGCCCAATTTTGGAGGAATTACTTGCCTCCGGTGTCTGTTGATGTTGTCGCCGGAATGATGAGTTATGGTAGGGTGGTGTGTTCCTCTTCCCCAATGCTTTACTTGGGAACACAGTCAGAGGAGGCCTTTAAGATTGTGTCCAGCTGCTTTGTGAAGCTGAAGGGTGAATTGGATAGACAGGAAAATAGTGTTCTTGATGTGCAAGATAACAAGGATACTTCTTCATCATCAGATTGGAAAATTGAACAAAGTGGATTATCGGATTACATTAACTATCCATACTTTGAACAATTTCGGCTATGTATTAAAGCTTTCTATGGTGTTATTTGTCTGCTAGACTAG 2001 0.4068 MEEGKGRSESGPNPRVNGTSFSINDPENQRAKKLWTVDNVKAMRFKSLAAAKSFYRLYAAATGFEVQKQGSFRGVGGQVIMRRWVCNRGGCCKKKKNLEKAKHSIRADCPAAFCVSLGYASRRWLVREFVAEHTHELGFKLFPQIYQPIEVEDYLTSLKDSSTSYRSYITIEDAEAAISYLTEKKDSEPRLFYEVNYVNASLARIFFADSMAQLDCSCFGDVVAVYRTNSSDLHFVILFSLNHHHQTTILGCAILGEETVEAYTWMFQKFLDLMQGCMPLSIVTDGNKALGEAIKSVLPESRHRLCTWHLEKIASSIVDNPSFLADFKALMLDFLSLNDFELKWKAMVDNYKLSENPWILEMYRKRHEWAETYLRGHFWAGLRSTKVCQVLDGNLSRLSLHELKLNQVLSLYDSVVMKIRINEGKADYDSKYSKFAPSTSLVKMEKQAFDIFTRESYQRFLSEMQMEMHLVALEIDYDDPPCRKYKLAKIDHEDLAYEVMFNPCGLTIECSCLKFETFGFPCSHIFHVLKSEGFKDVPHNLMHQRWTKSAKSTAQFWRNYLPPVSVDVVAGMMSYGRVVCSSSPMLYLGTQSEEAFKIVSSCFVKLKGELDRQENSVLDVQDNKDTSSSSDWKIEQSGLSDYINYPYFEQFRLCIKAFYGVICLLD 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03196 666 Pfam MULE transposase domain 225 312 IPR018289 -
Aip08g03196 666 MobiDBLite consensus disorder prediction 1 25 - -
Aip08g03196 666 SMART 26again6 508 535 IPR006564 GO:0008270
Aip08g03196 666 PANTHER PROTEIN FAR-RED IMPAIRED RESPONSE 1 35 555 - -
Aip08g03196 666 ProSiteProfiles Zinc finger SWIM-type profile. 497 533 IPR007527 GO:0008270
Aip08g03196 666 Pfam FAR1 DNA-binding domain 53 137 IPR004330 -
Aip08g03196 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 555 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03196 Aip-Chr8 122694127 122696228 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g03196 MULE 2.9e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03196 - - adu:107463166 1244.95