Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03190 ATGGGAGACGGAGGTTCCGGCAACCGCGGCGGCAACAGCAACAACAGCGGCGGCGGAAGCAACAAGCCGGAGTGGCTCCAGCAATACGATCTCATAGGGAAGATCGGAGAAGGCACGTACGGACTCGTGTTCTTGGCGCGCATAAAGTCCCAAACCAATCGCGGCAAATCCATTGCCATCAAGAAATTCAAGCAGTCCAAAGATGGCGACGGTGTTTCTCCCACCGCTATTCGCGAAATCATGCTGCTGAGGGAGATAACCCACGAGAATGTTGTGAAGCTTGTAAATGTACACATCAATCACGCGGACATGTCTCTGTATCTTGCTTTTGATTACGCCGAGCACGACCTCTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATACATCGAGATTTAAAGCCCTCAAATATACTGGTTATGGGTGAAGGGGAGGAGCATGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAATCCCCTTTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTACCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGTAGAAGTCAAAGCTACCCCAAATCCCTTTCAGCTCGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAATCTCCCCCATTGGCAACAAGATGTTCAACATATACAAGGGCATAAATATGATAACAACAGTCTCTATAATGTTGTTCACCTATCTCCAAAAAGTCCTGCATTTGACCTTTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATTACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATTGAACCACAGCCTGGGCGGAATGCCCTTGTACCCTGCCAACCGGGAGAGACATTTGTGAATTATCCCACTCGTCCAGTGGACACAACAACCGATTTTGAAGGGACAACCAATATGCAACCTCCACAGCCGAGTCAGGTTACATCGGGAGCTGCAGTTTCTGGCAGTATGCCTGGTGGTCATGTGTCAAATAGATCTGTTCCTCGACCAATGAATGTTGTTGGGATGCAAAGAATGCCTCATCAGGCAATGCAAGCTTATAATCTTACATCTCAGGCAGGGATGGGTGGTGGAATGAACCCTGGTGGCATGCCGATGCAACGAGGTGTACCACAGCCGCATCAGCAACAGCAGTTGAGGAGAAGAGACCAAATGGGGATGCCAGGATACCCTCAACAAAAGTCAAGACGTATATAA 1437 0.4572 MGDGGSGNRGGNSNNSGGGSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQSPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNNSLYNVVHLSPKSPAFDLLSKMLEYDPRKRITAAQALEHEYFKIEPQPGRNALVPCQPGETFVNYPTRPVDTTTDFEGTTNMQPPQPSQVTSGAAVSGSMPGGHVSNRSVPRPMNVVGMQRMPHQAMQAYNLTSQAGMGGGMNPGGMPMQRGVPQPHQQQQLRRRDQMGMPGYPQQKSRRI 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03190 478 SUPERFAMILY Protein kinase-like (PK-like) 24 340 IPR011009 -
Aip08g03190 478 MobiDBLite consensus disorder prediction 377 407 - -
Aip08g03190 478 MobiDBLite consensus disorder prediction 1 22 - -
Aip08g03190 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Aip08g03190 478 Pfam Protein kinase domain 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03190 478 PANTHER CYCLIN-DEPENDENT KINASE E-1 16 476 - -
Aip08g03190 478 PANTHER CELL DIVISION PROTEIN KINASE 16 476 - -
Aip08g03190 478 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Aip08g03190 478 Gene3D Transferase(Phosphotransferase) domain 1 112 353 - -
Aip08g03190 478 MobiDBLite consensus disorder prediction 377 393 - -
Aip08g03190 478 MobiDBLite consensus disorder prediction 434 478 - -
Aip08g03190 478 MobiDBLite consensus disorder prediction 7 22 - -
Aip08g03190 478 ProSitePatterns Protein kinases ATP-binding region signature. 35 62 IPR017441 GO:0005524
Aip08g03190 478 CDD STKc_CDK8_like 28 339 - -
Aip08g03190 478 SMART serkin_6 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03190 478 ProSiteProfiles Protein kinase domain profile. 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03190 Aip-Chr8 122621268 122627170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03190 22 478 Core Cell Cycle Gene Families AT5G63610 76.674 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Aip08g03190 Pkinase 9.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03190 K02208 - gmx:100813433 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03190 08 122621268 122627170 Aip08g03190 08 122621268 122627170 ECH