Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03187 ATGGAAGAAGCAAAAGAGAAGGGTGTGTTTAATGAAGACAAGGCTTCTTTGGTGGTTAAAGAGCTGAGAAAGAGCTTTGACTCAGGGAAGACAAGAAGCTACAAATGGAGGATTTCGCAGTTGGAAGCCATGGCTAAGATGATTGAAGAAAATGAGAAGGACATCATTGAAGCAGTAGATAAGGACCTTTCTAAACCTCAACTTGAAGCATACATAGCTGAGGTTTCTCAGACAAAATCTTCATGCAGTGAAGCAATTAAAGCATTGCATCAGTGGATGAAGCCTACAAAGGTGAAAACTGCGATTACAACATATCCATCATCAGCAGAGATTGTATCAGAACCACTTGGAGTTGTGCTCATCATCTCAACATGGAACTTCCCTTTCATGTTATCGCTGGAGCCGGTGATCGGCGCAATCGCGGCCGGGAATGCAGTGGTTCTGAAGCCATCAGAAGTTGCTCCGGCATCATCAGCACTGCTGGCAGATATGCTGACAAAATATTTGGACAACTCTGCTGTCAGAGTTATTGAAGGAGGTGCTCCTCAAACAACCGCACTATTGGAGCAGAAATGGGATAAGATACTCTACACAGGTAATGCTAGAGTAGGACGAATTGTGATGGCTGCTGCTACAAAGCACCTTACCCCAGTGATTCTGGAACTTGGTGGAAAGTGCCCTGCTCTTGTTGATTCTAATCTCAACTTGCAAGTTGCTGCTAGAAGATTAATAGCTGGAAAGTGGGCATGCAACAATGGACAAGCATGCATTTCTGTTGATTATATCATCACTCTTAAACATTTTGCTCCAACACTTATAAATGCTCTCAAGGAGGAATTGGAGCAATTTTTCGGAAAAGATCCAATGAAATCCAAAGACATGTCGCGAATCGTGTCTTCGTCGCACTTTTCGCGACTCTTAAAGCTTTTGAATGATGACAAGATATCTGATAAAATTGTTTTAGAAGGTCAGAAGGACGAGGATCAATTAAAGATTGCTCCAACAATCATATTGGATGCACCAGATGATTCATTGGTGATGCAAGAGGAAATATTTGGGCCAATAATGCCAATTATCACTGTTGATAAGATAGAAGATGGGTTTGATATAATAAAATCAAAACCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAAGACCTGAAGAAAAGTTTTGTGGAAAACATTTCTTCAGGAGGGATGCTCATCAATGACACTGTCTTACAAGTTGTAACTCCTGGTTTGCCATTTGGAGGAGTTGGAGAGAGTGGAATGGGTTGCTACCATGGCAAATTCTCCTTTGATGAATTCAGCCACAAAAAAGGTGTTCTCTATAGAAGTTTCAAAGCTTGGTTTGGTAGTAGTAGTAGTAGTAATAGTAATAAGCATAAAAGTATTAGTTCCAATTATGGAAATGGAAGAAGAAACTCTATTCCTCTTGATGAACCTTCCTCTTCCTCTTCCTCTTCCTCCTCGTCTTCATGGTTATCATCGTCGTTGCTTAATCAGTATCGAGCTAGCTCATCCGTCGTGTTTCGAGTTCACGGCAACGTTTATCCGGTTGGGTTCTATAATGTTACATTGAACATAGGGCACCCACCAAGGCCTTATTACCTTGACATTGATACAGGCAGCGACCTCACATGGCTTCAATGTGATGCCCCTTGTACTCATTGCACTCAGACGCCGCATCCGTTGTACCGGCCGAGCAATGACTTGGTGGCATGTAGGGATCCAATGTGTGCATCATTGCATCAGAATGAAGCATATGAATGTGAACAGCCACACCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCTTCCCTTGGTGTTCTTGTGAATGATGTGTACCTTCTGAACTTCACAAATGGAATCCAACTGAGAGTTAGAATGGCACTTGGATGTGGATATGATCAGCTATTTCAAGAGCACTCATACCATCCATTGGATGGAATGCTTGGTCTTGGAAGGGGAAGATCAAGCTTGGTTTCACAGCTTAATAGTCAGGGTTTGGTTAGAAATGTAGTTGGACACTGCTTGAGTTCACAAGGGGGAGGCTATATCTATTTTGGTCATGTTTTTGACTCTTCTAGACTCACTTGGACTCCTATGACATCCACACATTTCAAACATTACTCAGCTGGGCCAGCTGAACTCCTTTTGGGAGGAAAGAGAACTGGGATTGGAAATCTCCATGGTGTTTTTGACACTGGAAGTTCTTACACTTACTTCAACTCCATGGCTTACCAAGCAGCAATTTCTTGGTTAAATAAGGAGTTAGCTGGGAAGCCTTTAAAAGAAGCACATGATGATCACACACTCCCTCAATGTTGGCATGGTAGAAGGCCTTTCAGAAGCATACATGAAGTCAGAAAATACTTCAAGCCTATGGCGCTTTCTTTCGCCGGCGGCGGCCGAAGTAAAGCTCAGTTTGAAATCCCTCCTGAGGCATACCTCATAATATCAAACATGGGAAATGTTTGCTTGGGAATCTTAAATGGATCTGAAGTAGGGATGGGAGATCTAAACCTAATTGGAGACATATCCATGCAAGACAAAGTGATGGTATTTGACAATGAGAAAATGATGATTGGTTGGGCACCAGCAGATTGTGACAAAATCCCCAAATCAAGACATGCCAACATTTAA 2658 0.421 MEEAKEKGVFNEDKASLVVKELRKSFDSGKTRSYKWRISQLEAMAKMIEENEKDIIEAVDKDLSKPQLEAYIAEVSQTKSSCSEAIKALHQWMKPTKVKTAITTYPSSAEIVSEPLGVVLIISTWNFPFMLSLEPVIGAIAAGNAVVLKPSEVAPASSALLADMLTKYLDNSAVRVIEGGAPQTTALLEQKWDKILYTGNARVGRIVMAAATKHLTPVILELGGKCPALVDSNLNLQVAARRLIAGKWACNNGQACISVDYIITLKHFAPTLINALKEELEQFFGKDPMKSKDMSRIVSSSHFSRLLKLLNDDKISDKIVLEGQKDEDQLKIAPTIILDAPDDSLVMQEEIFGPIMPIITVDKIEDGFDIIKSKPKPLAAYLFTNNEDLKKSFVENISSGGMLINDTVLQVVTPGLPFGGVGESGMGCYHGKFSFDEFSHKKGVLYRSFKAWFGSSSSSNSNKHKSISSNYGNGRRNSIPLDEPSSSSSSSSSSSWLSSSLLNQYRASSSVVFRVHGNVYPVGFYNVTLNIGHPPRPYYLDIDTGSDLTWLQCDAPCTHCTQTPHPLYRPSNDLVACRDPMCASLHQNEAYECEQPHQCDYEVEYADHYSSLGVLVNDVYLLNFTNGIQLRVRMALGCGYDQLFQEHSYHPLDGMLGLGRGRSSLVSQLNSQGLVRNVVGHCLSSQGGGYIYFGHVFDSSRLTWTPMTSTHFKHYSAGPAELLLGGKRTGIGNLHGVFDTGSSYTYFNSMAYQAAISWLNKELAGKPLKEAHDDHTLPQCWHGRRPFRSIHEVRKYFKPMALSFAGGGRSKAQFEIPPEAYLIISNMGNVCLGILNGSEVGMGDLNLIGDISMQDKVMVFDNEKMMIGWAPADCDKIPKSRHANI 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03187 885 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 442 IPR016162 GO:0016491
Aip08g03187 885 CDD ALDH_F3FHI 15 446 - -
Aip08g03187 885 Pfam Aldehyde dehydrogenase family 13 442 IPR015590 GO:0016491
Aip08g03187 885 Gene3D Acid Proteases 500 694 IPR021109 -
Aip08g03187 885 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 4 451 - -
Aip08g03187 885 SUPERFAMILY Acid proteases 517 877 IPR021109 -
Aip08g03187 885 ProSiteProfiles Peptidase family A1 domain profile. 525 870 IPR033121 -
Aip08g03187 885 SUPERFAMILY ALDH-like 18 449 IPR016161 GO:0016491
Aip08g03187 885 Pfam Xylanase inhibitor C-terminal 736 870 IPR032799 -
Aip08g03187 885 Pfam Xylanase inhibitor N-terminal 525 695 IPR032861 -
Aip08g03187 885 Gene3D Acid Proteases 695 878 IPR021109 -
Aip08g03187 885 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Aip08g03187 885 MobiDBLite consensus disorder prediction 455 493 - -
Aip08g03187 885 PANTHER ALDEHYDE DEHYDROGENASE 4 451 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03187 Aip-Chr8 122603627 122613475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03187 10 449 Aldehyde Dehydrogenase Gene Family AT4G34240 68.409 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03187 K00128 - adu:107463231 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03187 08 122603627 122613475 Aip08g03187 08 122603627 122613475 ECH
Aip05g00305 05 3397217 3401764 Aip08g03187 08 122603627 122613475 ECH