Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03174 aTGGATCACTTGTTGAATCTTAATATTTTAATACACCGGAGCTGGTGGGCTGTTCCGCCGCTCTTCGTCGCGGCTGAGGCCGTCGCCGCCGCAGATGCGTCCGTGCCGTTGTGTGTCGCCGTCAGAGGAAGAGGAGCGCGAACCAGAGCCATGCAAGGGAGGAGCAGAGCGCACGCAGGGGAGAAGTGCCTTCGATTTAATTGCATCCAAATTTTCTTTACTTGTGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTTTGAATTCTGAAAAAGACACTTTCCGGGATGATGGCTCTACTGCTTCAACTGCTGTTTTGGTTGATAACTATCTCTATGTTACTAATGTTGGAGATTCTGGGACTATAATATTGAAGGCTGGTAAAGCAATTGCTCTCTCAGGAGTTGATGAACAGAAGAGGAAttga 441 0.4671 MDHLLNLNILIHRSWWAVPPLFVAAEAVAAADASVPLCVAVRGRGARTRAMQGRSRAHAGEKCLRFNCIQIFFTCAKLAISETYQGTDSQFLNSEKDTFRDDGSTASTAVLVDNYLYVTNVGDSGTIILKAGKAIALSGVDEQKRN 146
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03174 146 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 72 139 - -
Aip08g03174 146 Pfam Protein phosphatase 2C 79 138 IPR001932 -
Aip08g03174 146 SUPERFAMILY PP2C-like 73 138 IPR036457 -
Aip08g03174 146 Gene3D - 44 145 IPR036457 -
Aip08g03174 146 PANTHER ALPHABET, ISOFORM E-RELATED 72 139 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip08g03174 Aip-Chr8 122416707 122419197 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03174 52 146 PP2C-type Phosphatase Gene Family AT5G53140 60.204 9.41e-26 99.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03174 K17506 - gmx:100805795 107.457