Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03117 ATGGTGGTGGTTGTTGAGGAGAGTGCGGATGGTGATGCCGTGCAGGACAAGGAAGTGGTTAGCAGGATGGTTGAGGTTGAGGAAGAGAAGGTTGTGAAAGAGGAGAAGCTGGTTGAGGAAGAAAAGGTTGTGAAAGAGGAGAGGCTTGTGGAGGAAGAAAAGGGCGTCGCAAGGACGGTGAAGTTGGTGTTTGGAGAGGATATTAGATGGGCACAGCTTCCTGCCAATTGTAGTGTGAGGTTGGTGAGGGATATAGTTAGGGATCGGTTTCCGGGTTTGAAGGGTGTTCTTGTGAAGTATAGGGATGAGGAGGGTGATTTGGTTACGATTACTACCACTGATGAGCTGAGGTTAGCTGAATCTGCTGTTCATGAGAATGGCTCAATTCGGTTTTATATTAGTGAGGTTGATTTGGACCAAGAGCCTTGTTATGATCGAGTAACCAATGAGGGTGACACCCAAGAAGACGGTAGTAAGAGGAATCTGGGCGATGGTGTTCAGAATGGGGGTGTGGGACAAGATACGGTTTTGGAAAATAATAATAACAAGATGACTGTTATGGAGGAATGGATTTTGCAGTTTGCACGGCTGTTCAAGAACCATGTTGGGTTTGATTCAGATTCTTATCTAGATTTTCATGAGCTGGCAATGAGTCTCTATGCAGAGGCAATGGAGGATACGGTAACAGGCGATGAAGCTCAAGAATTATTTGAGATTGCTGCAGACAAATTTCAAGAGATGTCAGCGTTGGCAATGTTTAATTGGGGGAATGTTCACATGTCCAAGGCAAGGAACAGGGCTTTCTTTGCAGAGGATGGGTCAAGAGAACCTTCTTTCGAGCATGTTAAAGCTGCATACGAGTGGGCCCTAAATGAGTACAAGAAAGCTGAGATGAGGTATGAGGAGGCCTTGAAGATCAAACCGGATTTTTTTGAAGGATATCTTGCTCTTGGACATCAGCAGTTTGAGCAAGCAAGGCTATGCTGGTGTTATGCGTTGGCATGCAAAGTGGATTTAGAAGCTGGTCCTTCCGAGGAGGTTCTTCAGCTCTACAACAAGGCAGAGGACAGCATGGAGAAAGGGATCTTGATGTGGGAGGAGATTGAGGAGCAGCGTTTAAATGGACTATCCAAATCCGATAAATATAGAGCACAATTAGAGAAAATGGGCATGGATAGGCTTCTCAAGGATATCTCGTCGGATGAAGCTTCAAAGAAGGCAACAAAGATGAAGTCACAAATATATCTTTATTGGGGTACCCTATTGTATGAACGTTCTGTTGTGGAATATAAGCTAGGCCTACCAACATGGGAGGAATGTTTGGAGGTTGCAGTCGAAAAGTTTGAGCTAGCTGGAGCTTCAGCAACGGATGTAGCTGTCATTATAAAGAATCACTGCTCTCATGAAACAGCACTTGAAGGGTTCAAAATTGATGAGATAGTACAGGCATGGAATGAAATGTATGATGCTCAAGGCTGGCTGTTTCGTGCTCCATCATTTCGACTTGAAGCATTGTTTCGTCGGCGCATTCCTAAACTACATTACATCTTGGAGCAACTTTAA 1563 0.4459 MVVVVEESADGDAVQDKEVVSRMVEVEEEKVVKEEKLVEEEKVVKEERLVEEEKGVARTVKLVFGEDIRWAQLPANCSVRLVRDIVRDRFPGLKGVLVKYRDEEGDLVTITTTDELRLAESAVHENGSIRFYISEVDLDQEPCYDRVTNEGDTQEDGSKRNLGDGVQNGGVGQDTVLENNNNKMTVMEEWILQFARLFKNHVGFDSDSYLDFHELAMSLYAEAMEDTVTGDEAQELFEIAADKFQEMSALAMFNWGNVHMSKARNRAFFAEDGSREPSFEHVKAAYEWALNEYKKAEMRYEEALKIKPDFFEGYLALGHQQFEQARLCWCYALACKVDLEAGPSEEVLQLYNKAEDSMEKGILMWEEIEEQRLNGLSKSDKYRAQLEKMGMDRLLKDISSDEASKKATKMKSQIYLYWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASATDVAVIIKNHCSHETALEGFKIDEIVQAWNEMYDAQGWLFRAPSFRLEALFRRRIPKLHYILEQL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03117 520 Gene3D - 49 136 - -
Aip08g03117 520 Coils Coil 23 43 - -
Aip08g03117 520 SUPERFAMILY CAD & PB1 domains 55 147 - -
Aip08g03117 520 MobiDBLite consensus disorder prediction 146 177 - -
Aip08g03117 520 Gene3D Tetratricopeptide repeat domain 207 396 IPR011990 GO:0005515
Aip08g03117 520 SMART PB1_new 57 136 IPR000270 GO:0005515
Aip08g03117 520 Pfam PB1 domain 58 133 IPR000270 GO:0005515
Aip08g03117 520 PANTHER PROTEIN CLMP1 22 519 IPR044517 -
Aip08g03117 520 PANTHER PROTEIN PHOX4 22 519 - -
Aip08g03117 520 SUPERFAMILY TPR-like 234 442 IPR011990 GO:0005515
Aip08g03117 520 CDD PB1 59 134 - -
Aip08g03117 520 ProSiteProfiles PB1 domain profile. 57 136 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03117 Aip-Chr8 121297471 121300173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03117 - - gmx:100805760 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03404 06 130906318 130907207 Aip08g03117 08 121297471 121300173 PCT