Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03095 ATGGTCATTCTTTCTTTCATAGTGATTCTTGCTTACATACTTTCTCCTTCTTCCCTTGCCACAGAACTTGATTATATTCATGTTTCCCAGTCCCTCAGTGATGGCATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAATTCACACAAGCGTTACTTGGGAATTTGGTACAAGAAAATTCCAGTTCAGACAGTTGTTTGGGTTGCCAATAGGGCCAACCCCATCAATGATTTCTCAGGAACTTTAACAGTGAAGAGCACGGGCAATCTTTCACTCACAGAAAATGGTACTGAAACTACTTTTTGGAGCACAATCTCTCGAAAACAAGCAAAGAATCCGGTATTGGAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTTCAGATACATACTTGCCATCGATGAAGTTAGGAAGGGACCTCCAAAACGGTTTTGATTGGTGCGTAACTTCTTGGAAGAGTCGAAATGATCCATCCCCTGTAGGCTTTTCTCTTGGTTTAGTTCTCAATGATTATCCTGAGTTTTCCATTATGAATGGCACAAAAAAATTATATCGGGCTGGACCTTGGAATGGCCTTTACTTAAGTGGCTACCCGGATCAATCCTATACATATATCTTTGAAACCACTTATGTCAAAAACAAGGATGAGATATCCTACAGCTCTAACACCAAGATTGATTCTATCCTTGCAAGAGCTGTAATAAACCAAACAAGTCAATCTATTACACAGTATATATGGGATGACAATCTTCAGAATTGGAAAAGTTTTGGATCAAAGCCAGTTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTTTAGTTATTGCAGTGTAACAGAACCACAGCATGTCTGCCAATGCTTCAAAGGGTTCAGTCCAAAGTCACCAGAAGCATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACAAACCATTAAGCTGCAATAATGTCACAAGCACTGATGGTTTTGTCAAATACACAGGCTTGAAAGTGCCGGATACTCAGCATACTAAGCTGCTTGAGAATATTAATTTAGATGAATGCAGAAATCTATGTTTGAAGAACTGCTCTTGTATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGTCATGTGGTTTGGTGATCTAATTGACATCAAAATATTTCAATCTGGTGGACAGGATCTGTACATCCGAATGCCTGCTTTGGAATCAGGACTTCAACATCGGAACATGAAAAAAGTGATAATTGCTAGCACCATTGCTGCAATTTGTGCAACACTTCTACTTTGTGTTTATGTTATATACAGAGTCCGAAGGAACAATATTGAATGGTCAAAAGCAGAATTGTTTGAAGGATATGTAAATGACACGGATCTACCCATGTTTGATCTACTAATGGTTACTACTGCCACTGACAACTTCTCCTTGAATAACAAGATTGGACAAGGTGGTTTTGGAACTGTATATAAGGGGAAATTAGCAGATGGGCAAGAAATTGCTGTCAAGAGACTTTCACAGAGTTCTGGCCAAGGAATGACGGAATTTCTAACTGAAGTGAAGCTTATTGCAAAGCTTCAGCATCGAAATTTAGTAAAACTTCTTGGTTGCTGCATTCGAGGACAAGAAAAGTTGTTAGTTTATGAATACATGGTTAATGGCAGCCTAGACAACTTCATTTTTGATCGAATGAAAAGCAAGTTGCTGGAGTGGCCTCAACGCTTCCTCATAATATTTGGAGTTGCTAGGGGACTTCTATATTTACACCATGATTCAAGATTGAGAATTATCCACAGAGATCTCAAATTAAGTAACGTTTTACTTGATGATAAGTTAAATCCTAAAATATCAGACTTTGGAATTGCTAGAGCTTTTGGAGTTGATCAGACTCATGGAAACACAAATAGAGTTATTGGGACTTATGGATACATGGCACCAGAGTATGCTATCAATGGGCTGTTTTCAGTAAAATCCGACGTCTTCAGCTTTGGTGTAATATTGATGGAGATTATAAGTGGGAACAGAAACAGAGCGCTTTGTCATGCAAATGAGACTCTTAATCTTGTTGGCTATGCTTGGATGCTTTGGAAAGAGGACAGGCCTTTGGAGCTGATCGATCCAAACATAAAGGAGTCATGTGTCATCCCAGAAGTATTGCGGTGCATCCATGTTAGTCTCTTATGTGTGCAACAACACCCTGAAGATCGGCCTACAATGGCCTCAGTACTTGTCATGTTAGGAAGTAAGATGGACTTAGTTGATCCTAAAGAGCCTGGCTTCTTTTCCTGCAAGCTCCCCACTGAAGTGAGTTCACACTCAGATCAACATAACATCATGTCTTTAAATGATGAATTAACTATTACCTCATTAGATGGTCGGTGA 2454 0.3985 MVILSFIVILAYILSPSSLATELDYIHVSQSLSDGMTLVSQGGKFELGFFSPGNSHKRYLGIWYKKIPVQTVVWVANRANPINDFSGTLTVKSTGNLSLTENGTETTFWSTISRKQAKNPVLELLDSGNLVLRNEGESNPKAYLWQSFDYPSDTYLPSMKLGRDLQNGFDWCVTSWKSRNDPSPVGFSLGLVLNDYPEFSIMNGTKKLYRAGPWNGLYLSGYPDQSYTYIFETTYVKNKDEISYSSNTKIDSILARAVINQTSQSITQYIWDDNLQNWKSFGSKPVDVCDKYDLCGAFSYCSVTEPQHVCQCFKGFSPKSPEAWNSNNSSQGCIRDKPLSCNNVTSTDGFVKYTGLKVPDTQHTKLLENINLDECRNLCLKNCSCMAYANSDIRGGGSGCVMWFGDLIDIKIFQSGGQDLYIRMPALESGLQHRNMKKVIIASTIAAICATLLLCVYVIYRVRRNNIEWSKAELFEGYVNDTDLPMFDLLMVTTATDNFSLNNKIGQGGFGTVYKGKLADGQEIAVKRLSQSSGQGMTEFLTEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMVNGSLDNFIFDRMKSKLLEWPQRFLIIFGVARGLLYLHHDSRLRIIHRDLKLSNVLLDDKLNPKISDFGIARAFGVDQTHGNTNRVIGTYGYMAPEYAINGLFSVKSDVFSFGVILMEIISGNRNRALCHANETLNLVGYAWMLWKEDRPLELIDPNIKESCVIPEVLRCIHVSLLCVQQHPEDRPTMASVLVMLGSKMDLVDPKEPGFFSCKLPTEVSSHSDQHNIMSLNDELTITSLDGR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03095 817 SUPERFAMILY Protein kinase-like (PK-like) 481 770 IPR011009 -
Aip08g03095 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 816 - -
Aip08g03095 817 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03095 817 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Aip08g03095 817 Pfam S-locus glycoprotein domain 209 320 IPR000858 GO:0048544
Aip08g03095 817 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Aip08g03095 817 Pfam PAN-like domain 344 410 IPR003609 -
Aip08g03095 817 ProSiteProfiles Protein kinase domain profile. 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03095 817 Gene3D - 19 148 IPR036426 -
Aip08g03095 817 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Aip08g03095 817 CDD PAN_AP_plant 338 425 - -
Aip08g03095 817 Pfam Protein tyrosine and serine/threonine kinase 500 767 IPR001245 GO:0004672|GO:0006468
Aip08g03095 817 SMART blect_4 29 151 IPR001480 -
Aip08g03095 817 SMART ntp_6 345 424 IPR003609 -
Aip08g03095 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Aip08g03095 817 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Aip08g03095 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Aip08g03095 817 Pfam D-mannose binding lectin 71 177 IPR001480 -
Aip08g03095 817 CDD STKc_IRAK 505 770 - -
Aip08g03095 817 ProSiteProfiles PAN/Apple domain profile. 341 425 IPR003609 -
Aip08g03095 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 816 - -
Aip08g03095 817 CDD B_lectin 29 151 IPR001480 -
Aip08g03095 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Aip08g03095 817 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Aip08g03095 817 Gene3D Hepatocyte Growth Factor 342 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03095 Aip-Chr8 120941334 120944682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03095 439 800 Receptor kinase-like Gene Family AT4G23190 51.344 1.05e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g03095 PK_Tyr_Ser-Thr 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03095 - - aip:110265385 1271.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03095 08 120941334 120944682 Aip08g03095 08 120941334 120944682 ECH