Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03094 ATGGGCATTCCTTCTTTCACAGTGATGCTTGCATACATGCTTTATTCTTCTTCTCTTGCCATAGAACTTGATTCTCTTCATGTTTCTCAGTCCCTCAGTGATGGCATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAATTCTTCACACAAGCGTTACTTGGGAATTTGGTACAAGAATATTCCAATTCAGACAGTTGTTTGGGTTGCCAATAGGGCCAACCCCATCATTGATTTCTCAGGAATTTTAACAGTTAACAGCACAGGCAATCTTTTACTCACAGAAAATGGCACTGAGATTACTTTTTGGAGCACAATCTCTCAAAAACAAGCAAAGAATCCGGTATTGAAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTTCAGATACATACTTGCCAACGATGAAGTTAGGAAGGGACCTCCGAAATGGTTTGGATTGGCGCATAACTTGTTGGAAGAGTCCAAATGATCCATCCCCTGGAGACTTCTCTCTTGGTTTAGCTCTCAGTGATTATCCAGTCTATTACATGATGAATGGCACGCAAAAAGTATATCGGGCTGGACCTTGGAATGGCCTTTACTTCAGTGGATTCCCAGATCTGTCCTTTACATATGTTTTTGAAGTCACTTTTGTCACAAACAAGGATGAGATATCCTATAGTTATAACACCAAGGTTGATTCTATCATTACAAGAGCTTTAATAAGCCAAACAAGTCAATCTCTTACGCAGTATATATGGGATGACGATCTTCAGAATTGGAAAAGTTTTGGATCAAAGCCAGTTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTTTAGTTATTGCAGTGTAGCAGAATCAAAGCATGTCTGCCAATGCTTTAAAGGGTTCAGTCCTAAGTCACCAGAAGCATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACAAACCATTAAGCTGCAATAATGTCACAAGCACTGATGGTTTTGTCAAATACACAGGCTTGAAAGTGCCGGATACTCAGCATACTAAGCTGCATGAGAATATTAATTTAGATGAATGCAGAAATCTGTGTTTGAAGAACTGCTCTTGTATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGCCATGTGGTTCGGTGATCTAATTGACATCAAACTGTTTCAATCTGGTGGACAGGATCTGTACATTCGAATGCCTGCTTTGGAATCAGGACTTCAACATCGGCACAAGCAAAAAGTGATAATTGCTAGCACCATTGCTGCATCTTCTGCAACACTTCTACTTTGTGTTTACGTTATATACAGACTCCGAAGGAACAATATTGAAAAATCAAAGATAGAAGGATATATGGAAGGGTACGTAAATGATGCGGATCTACCACTGTTTGATCTACTAACAATTACTACTGCCACCCAAAAGTTCTCGTTGAATAACAAGATTGGACAAGGTGGTTTTGGACCTGTTTATAAGGGAAGATTAGCAGATGGACTTGAAATTGCTGTGAAAAGACTCTCACATAGCTCTACACAAGGAATGACTGAATTCATAACTGAAGTAAAGCTAATTGCGAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGCTGCATTCAAGGAGAAGAAATTTTGTTAGTTTATGAATATGTGGTTAATGGTAGCCTGGACACCTTCATCTTTGATCAAACAAAAAGTAAGTTGTTGGATTGGCCTCAACGCTTGGGCATAATATTTGGACTTACTAGGGGACTCTTATATCTTCATCAAGATTCAAGATTGAGGATTATCCATAGAGATCTCAAAGCAAGTAACGTTTTACTCGATGACAAATTAAATCCAAAAATATCAGATTTTGGAACGGCCAGAACTTTTGGAGGAGATCAAACTGAAGGAAACACAAATAGAGTCGTTGGGACTTATGGATACATGGCACCAGAGTATGCTATAGATGGATTGTATTCTATAAAATCGGATGTCTTTAGCTTTGGCATACTTATGATGGAGATTATATGTGGGACCAAAAATAGAGCTCTTTGCCATGCAAATCAGACTCTCAATCTCATTGGTTATGCTTGGAGACTATGGAAAGAGGAGAAGGCTTTAGAGTTGATAGATTCAACTATAAAGGAGTCATGTATAATCTCAGAAGTAATGCGTTGCATCCATGTGAGTCTGTTGTGTGTACAACAATACCCTGAAGATAGGCCTACAATGGCTTCTGTGCTTCTCATGTTAGCAAGTGAGATGGATTTAGATGAGCCTAAAGAGCCTGGCTTCTTTCCCAAGTGGGTCTCTATCGAAGCGAATTCGCAGCCACATCAATGTGAAGTATCTACAAATGATGAATTAACCGTTACCTCATTAGATGGCCGGTGA 2457 0.398 MGIPSFTVMLAYMLYSSSLAIELDSLHVSQSLSDGMTLVSQGGKFELGFFSPGNSSHKRYLGIWYKNIPIQTVVWVANRANPIIDFSGILTVNSTGNLLLTENGTEITFWSTISQKQAKNPVLKLLDSGNLVLRNEGESNPKAYLWQSFDYPSDTYLPTMKLGRDLRNGLDWRITCWKSPNDPSPGDFSLGLALSDYPVYYMMNGTQKVYRAGPWNGLYFSGFPDLSFTYVFEVTFVTNKDEISYSYNTKVDSIITRALISQTSQSLTQYIWDDDLQNWKSFGSKPVDVCDKYDLCGAFSYCSVAESKHVCQCFKGFSPKSPEAWNSNNSSQGCIRDKPLSCNNVTSTDGFVKYTGLKVPDTQHTKLHENINLDECRNLCLKNCSCMAYANSDIRGGGSGCAMWFGDLIDIKLFQSGGQDLYIRMPALESGLQHRHKQKVIIASTIAASSATLLLCVYVIYRLRRNNIEKSKIEGYMEGYVNDADLPLFDLLTITTATQKFSLNNKIGQGGFGPVYKGRLADGLEIAVKRLSHSSTQGMTEFITEVKLIAKLQHRNLVKLLGCCIQGEEILLVYEYVVNGSLDTFIFDQTKSKLLDWPQRLGIIFGLTRGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGTARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANQTLNLIGYAWRLWKEEKALELIDSTIKESCIISEVMRCIHVSLLCVQQYPEDRPTMASVLLMLASEMDLDEPKEPGFFPKWVSIEANSQPHQCEVSTNDELTVTSLDGR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03094 818 SMART ntp_6 346 425 IPR003609 -
Aip08g03094 818 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
Aip08g03094 818 CDD PAN_AP_plant 339 426 - -
Aip08g03094 818 SMART serkin_6 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03094 818 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 814 - -
Aip08g03094 818 CDD B_lectin 29 152 IPR001480 -
Aip08g03094 818 Pfam D-mannose binding lectin 72 178 IPR001480 -
Aip08g03094 818 Pfam S-locus glycoprotein domain 210 321 IPR000858 GO:0048544
Aip08g03094 818 CDD STKc_IRAK 507 772 - -
Aip08g03094 818 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Aip08g03094 818 ProSiteProfiles Protein kinase domain profile. 501 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03094 818 Pfam PAN-like domain 345 411 IPR003609 -
Aip08g03094 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Aip08g03094 818 Pfam Protein tyrosine and serine/threonine kinase 502 769 IPR001245 GO:0004672|GO:0006468
Aip08g03094 818 SMART blect_4 29 152 IPR001480 -
Aip08g03094 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Aip08g03094 818 Gene3D Phosphorylase Kinase; domain 1 477 576 - -
Aip08g03094 818 Gene3D - 19 149 IPR036426 -
Aip08g03094 818 Gene3D Hepatocyte Growth Factor 342 422 - -
Aip08g03094 818 SUPERFAMILY Protein kinase-like (PK-like) 487 791 IPR011009 -
Aip08g03094 818 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Aip08g03094 818 PANTHER - 23 814 - -
Aip08g03094 818 PIRSF SRK 2 818 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03094 Aip-Chr8 120915477 120918611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03094 440 789 Receptor kinase-like Gene Family AT4G23190 52.809 1.67e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g03094 PK_Tyr_Ser-Thr 7.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03094 - - aip:110265385 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03094 08 120915477 120918611 Aip08g03094 08 120915477 120918611 ECH