Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03093 ATGGGCATTCCTTCTTTCACAGTGATGCTTGCTTACATGCTTTCTTCTTCTTCTCTTGCCATAGAACTTGATTCTCTTCATGTTTCCCAGTCCTTCAGTGATGGCATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAACTCTTCACACAAGCGTTACTTGGGAATTTGGTACAAGAAAATTCCAATTCAGACAGTTGTTTGGGTTGCCAATAGGGTCAACCCCATCAATGGTTCCTTAGGAACTTTAACAATTAACAGCACAGGCAATCTTTTACTCACAGAAAATGGCACTGAGACTACTGTTTGGAGCACAAGCACAATCTCTCAAAAACAAGCAAAGAATCCGGTATTGAAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTACAGATACATTCTTGCCAACCATGAAGTTGGGAAGGGACCTCCGAAAAGGTTTGGATTGGCGCATAACTTGTTGGAAGAGTCCAAATGATCCATCCCCTGGAGACTTTTCTCTTGGTTTAGTTGTAAGGGATTATCCAGTCTATTACATGATGAATGGCACACAAAAAGTATATCGGTCTGGACCTTGGAATGGCCTTTACTTCAGTGGATTCCCAGATCTGTCCTTTACATATGTTTTTGAAGACAGTTTTGTCACAAACAAGGATGAGATATCCTATAGTTATAACACCAAGGTTGATTCTATCATTGGAAGAGGTGTAATAAGCCAAACAAGTCAATCTCTTACAAGTTATTTATGGGATGACAATCTTCAGAATTGGAAAGTTTCTGCATCAACGCCAGGTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTATGCTTATTGCAGTGTAGCAGAATCACAGCATCTCTGCCAATGCTTTAAAGGGTTTAGTCCAAAGTCACCAGAAGAATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACGATCCATTAAGCTGCAATGTCACAAGCACTGATGTGTTTGTGAAATATACAGGCTTGAAAGTGCCAGATACTCAGCATACTAAGCTGCATGAGAATATTAATTTAGATGAATGCAGAAATCTGTGTTTGAAGAACTGCTCTTGTATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGCCATGTGGTTCGGCGATCTAATTGACATCAAACTGTTTCAAAATGGTGGACAAGATCTATACATCCGAATGCCTGCTTTTGAGTCAGGACTTCAACATCGGCACAAGCAAAAAGTGATCATTGCTAGCACCATTGTTGCATTTTGTGCAACACTTCTACTTTGTGTTTATGTTATATACAGAGTCCGAAGGAACAATATTGAAAAATCAAATATAGAAGAATATGTAAATGATACAGATCTACCATTATTTGATCTACTAACAATTACTACTGCCACGCACAAGTTCTCGTTGAATAACAAGATTGGACAAGGCGGTTTTGGACCTGTTTATAAGGGGAAATTAGCAGATGGGCAAGAAATTGCTGTCAAGAGACTTTCACAGAGTTCTGGCCAAGGAATGACGGAATTTCTAACTGAAGTGAAGCTTATTGCAAAGCTTCAGCATCGAAATTTAGTAAAACTTCTTGGTTGCTGCATTCGAGGACAAGAAAAGTTGTTAGTTTATGAATACATGGTTAATGGCAGCCTAGACAACTTCATTTTTGATCGAATGAAAAGCAAGTTGCTGGAGTGGCCTCAACGCTTCCTCATAATATTTGGAGTTGCTAGGGGACTTCTATATTTACACCATGATTCAAGATTGAGAATTATCCACAGAGATCTCAAATTAAGTAACGTTTTACTTGATGATAAGTTAAATCCTAAAATATCAGACTTTGGAATTGCTAGAGCTTTTGGAGTTGATCAGACTCATGGAAACACAAATAGAGTTATTGGGACTTATGGATACATGGCACCAGAGTATGCTATCAATGGGCTATTTTCAGTAAAATCCGACGTCTTCAGCTTTGGCGTAATATTGATGGAGATTATAAGTGGGAACAGAAATAGAGCGCTTTGTCATGCAAATGAGACTCTTAATCTTGTTGGCTATGCTTGGATGCTTTGGAAAGAGGACAGACCTTTGGAGCTGATTGATCCAAACATTAAGGAGTCGTGTGTCGTGGCAGAAGTATTGCGGTGCATCCATGTAAGTCTCTTATGTGTGCAACAACACCCGGAAGATCGGCCAACAATGGCCTCAGTACTTGTCATGTTAGGAAGTAAGATGGATTTAGTTGAGCCTAAAGAGCCTGGCTTCTTTTCCTGCAAGCTCCCCACTGAAGTGAATTCACACTCAGATCAACATAACATCATCACTTTAAATGATGAATTAACTATTACCTCATTAGATGGTCGGTGA 2451 0.3998 MGIPSFTVMLAYMLSSSSLAIELDSLHVSQSFSDGMTLVSQGGKFELGFFSPGNSSHKRYLGIWYKKIPIQTVVWVANRVNPINGSLGTLTINSTGNLLLTENGTETTVWSTSTISQKQAKNPVLKLLDSGNLVLRNEGESNPKAYLWQSFDYPTDTFLPTMKLGRDLRKGLDWRITCWKSPNDPSPGDFSLGLVVRDYPVYYMMNGTQKVYRSGPWNGLYFSGFPDLSFTYVFEDSFVTNKDEISYSYNTKVDSIIGRGVISQTSQSLTSYLWDDNLQNWKVSASTPGDVCDKYDLCGAYAYCSVAESQHLCQCFKGFSPKSPEEWNSNNSSQGCIRDDPLSCNVTSTDVFVKYTGLKVPDTQHTKLHENINLDECRNLCLKNCSCMAYANSDIRGGGSGCAMWFGDLIDIKLFQNGGQDLYIRMPAFESGLQHRHKQKVIIASTIVAFCATLLLCVYVIYRVRRNNIEKSNIEEYVNDTDLPLFDLLTITTATHKFSLNNKIGQGGFGPVYKGKLADGQEIAVKRLSQSSGQGMTEFLTEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMVNGSLDNFIFDRMKSKLLEWPQRFLIIFGVARGLLYLHHDSRLRIIHRDLKLSNVLLDDKLNPKISDFGIARAFGVDQTHGNTNRVIGTYGYMAPEYAINGLFSVKSDVFSFGVILMEIISGNRNRALCHANETLNLVGYAWMLWKEDRPLELIDPNIKESCVVAEVLRCIHVSLLCVQQHPEDRPTMASVLVMLGSKMDLVEPKEPGFFSCKLPTEVNSHSDQHNIITLNDELTITSLDGR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03093 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 815 - -
Aip08g03093 816 Gene3D - 19 151 IPR036426 -
Aip08g03093 816 CDD B_lectin 29 154 IPR001480 -
Aip08g03093 816 SUPERFAMILY Protein kinase-like (PK-like) 478 769 IPR011009 -
Aip08g03093 816 Gene3D Transferase(Phosphotransferase) domain 1 574 779 - -
Aip08g03093 816 SMART blect_4 29 154 IPR001480 -
Aip08g03093 816 PIRSF SRK 2 816 IPR024171 GO:0004674
Aip08g03093 816 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
Aip08g03093 816 ProSiteProfiles EGF-like domain profile. 288 325 IPR000742 -
Aip08g03093 816 Gene3D Hepatocyte Growth Factor 343 423 - -
Aip08g03093 816 CDD STKc_IRAK 504 769 - -
Aip08g03093 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Aip08g03093 816 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03093 816 Pfam PAN-like domain 344 412 IPR003609 -
Aip08g03093 816 Pfam D-mannose binding lectin 72 180 IPR001480 -
Aip08g03093 816 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03093 816 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Aip08g03093 816 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Aip08g03093 816 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Aip08g03093 816 Pfam Protein tyrosine and serine/threonine kinase 499 766 IPR001245 GO:0004672|GO:0006468
Aip08g03093 816 CDD PAN_AP_plant 341 427 - -
Aip08g03093 816 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 815 - -
Aip08g03093 816 SMART ntp_6 347 426 IPR003609 -
Aip08g03093 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03093 Aip-Chr8 120882356 120912237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03093 441 799 Receptor kinase-like Gene Family AT4G23190 51.892 1.61e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g03093 PK_Tyr_Ser-Thr 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03093 - - aip:110265385 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03093 08 120882356 120912237 Aip08g03093 08 120882356 120912237 ECH