Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03092 ATGGGTGTTCTTCATCCCATGGTTATGGCTGCTTATATACTTGTTTCCTCTGTCACAGCTTCTAACGCAGTTGTTTCCTCTGTCACAGCTTCTACGGCAGTTGTTTCCTCTGTCACAACTTCTATGGCAGTTAATGATTCCATTGGTCTTTCCCAGTACATGATTGATGGTGAGACCTTAGTGTCCAAAAATGGATTATTTGAGCTTGGATTCTTCAGACCCGGCAACTCGACCAAGTGTTACTTGGGGATCTGGTACAAGAAAATGGCCATGCATGCTGTTGTTTGGGTTGCTAACAGGGTTAACCCCATCAATGGTTTCTCAGGAAACTTAACAATGGACAACACCGGAAATCTTATCCTTAAAAACAATGGCTCAGTTGTTTGGAGCACGGCCTCTCAAAGAGAACCACGGAATCCGGTGGCACAGCTCATGGACAGTGGCAATCTTGTGATATGGAATGGTGGAGGTGCAGAGTCAAATGAAATTTTGTGGCAAAGCTTTGACTATCCAACTGATACATGTTTGCCAGGCATGAAGATAGGAAGGAATCTCCAAAATGGTTCGGATTGGCGATTAACATCTTGGAAGAGTGTAGATGATCCTTCTCCAGGTAACTTCTCTTGGGGGTTAGCCCTCAGTGATTATCCTGAGTTTGCCATCATGAATGGAACCAAAAAGTTCTCTCGGATTGGACCTTGGAATGGCTTGTATTTTAGTGGATTGCCAAACCTAATTGCTGATTCTAACTCTGGTATTATATTCATCGATGTCGACAACCAGAACGAGATATACTACACCTCTAGCTCCAAGAATGATTCTATCATCTCCAGAGTTGTAATAAACCAAACAAGTAAAGCGTATAGTCGGTATGTCTGGGTGGAAAAGACTCATACTTGGAGTGTTTTTGAGTCATTGCCTAATGATGTCTGTGATAATTATAACCTTTGCGGAGCCTATGGGAGTTGTATGACCACAGCAGCTCAAATTTGCCGTTGTTTAAGAGGTTTCAGGCCCAAGTCACCAGAAGCATGGAACTCATCAAACTGGGCTCAAGGATGTGTCCACAATGAACCATTAAGCTGCACTGGCATTACCGAAAGCACTGATGGATTTGTCAAATACACAGGCTTGAAACTACCAGATACTGAACGTACTAGGCTGATTGATACTCTTGATATAGGTGACTGCAGGGCTTTGTGCTTGAATAATTGCTCTTGTACGGCTTATACTAATCCAGACATAAGGATGGGTGGTGTTGGCTGTGTCATGTGGTTCGGCGATCTATTTGACATCAAACTGTTTCAATCTGGTGGACAAGATCTATACATCCGAATGCCTGCTTCTGAGTTAGATTCCAACAATGAACTTCAACACAGGAGCAAGAATAATAAAGTGATCATTGTTAGCACCGTTGCTGCAATTTGTGGGACGTTCTTACTTTGTGTTTTCGTTATATATAGATTTCGAAGGAACAAAAAATCAAAGATAGAAGAATATATGGAAGGGCATGTAAATGATACGGATCTACCATTGTTTGATCTACTAACAATTACTACTGCCACACACAAGTTCTCGTTGAATAACAAGATTGGACAAGGTGGTTTTGGACCTGTTTATAAGGGAAAATTAGCAGATGGTCTTGAAATTGCTGTGAAGAGACTCTCACATAGCTCTACACAAGGAATGACCGAATTCATAACTGAAGTAAAGCTAATTGCGAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGCTGCATTCAAGGAGAAGAAATTTTGTTAGTTTATGAATATGTGGTTAATGGTAGCCTGGACACCTTCATCTTTGATCAAACAAAAGGTAAGTTGTTGGATTGGCCTCAACGCTTGGGCATAATATTTGGAATTACTAGGGGACTCTTATATCTTCATCAGGATTCAAGATTGAGGATTATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTCGATGACAAATTAAATCCAAAAATATCAGATTTTGGAACGGCCAGAACTTTTGGAGGAGATCAAACTGAAGGAAACACAAATAGAGTCGTTGGGACTTATGGATACATGGCACCAGAGTATGCTATTGACGGTTTGTATTCTATAAAATCCGATGTCTTCAGCTTTGGCATACTTATGATGGAAATTATATGTGGGACTAAAAATAGAGCTCTTTGCCATGCAAATCAAACTCTTAACCTCATTGGCTATGCTTGGAGGCTATGGAAAGAGGAGAAGGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGTATTGCGATGCATCCATTTGAGTCTGTTGTGTGTACAACAATACCCTGAAGATAGGCCTACAATGGCTTCTGTGCTTCTCATGTTAGCAAGTGAGATGGATTTAGTTGACCCTAAAGAGCCTGGCTTCTTTCCCAAGAGGGTTTCTATCGAAGCGAATTCGCAGCCACATCAATGTGAAGTATCTACAAATGATGACTTAACCATTACCTCATTAGATGGCCGGTGA 2529 0.4089 MGVLHPMVMAAYILVSSVTASNAVVSSVTASTAVVSSVTTSMAVNDSIGLSQYMIDGETLVSKNGLFELGFFRPGNSTKCYLGIWYKKMAMHAVVWVANRVNPINGFSGNLTMDNTGNLILKNNGSVVWSTASQREPRNPVAQLMDSGNLVIWNGGGAESNEILWQSFDYPTDTCLPGMKIGRNLQNGSDWRLTSWKSVDDPSPGNFSWGLALSDYPEFAIMNGTKKFSRIGPWNGLYFSGLPNLIADSNSGIIFIDVDNQNEIYYTSSSKNDSIISRVVINQTSKAYSRYVWVEKTHTWSVFESLPNDVCDNYNLCGAYGSCMTTAAQICRCLRGFRPKSPEAWNSSNWAQGCVHNEPLSCTGITESTDGFVKYTGLKLPDTERTRLIDTLDIGDCRALCLNNCSCTAYTNPDIRMGGVGCVMWFGDLFDIKLFQSGGQDLYIRMPASELDSNNELQHRSKNNKVIIVSTVAAICGTFLLCVFVIYRFRRNKKSKIEEYMEGHVNDTDLPLFDLLTITTATHKFSLNNKIGQGGFGPVYKGKLADGLEIAVKRLSHSSTQGMTEFITEVKLIAKLQHRNLVKLLGCCIQGEEILLVYEYVVNGSLDTFIFDQTKGKLLDWPQRLGIIFGITRGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGTARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANQTLNLIGYAWRLWKEEKALELIDSSIKESCVISEVLRCIHLSLLCVQQYPEDRPTMASVLLMLASEMDLVDPKEPGFFPKRVSIEANSQPHQCEVSTNDDLTITSLDGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03092 842 Gene3D Transferase(Phosphotransferase) domain 1 601 805 - -
Aip08g03092 842 ProSiteProfiles PAN/Apple domain profile. 362 447 IPR003609 -
Aip08g03092 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Aip08g03092 842 PIRSF SRK 17 842 IPR024171 GO:0004674
Aip08g03092 842 ProSiteProfiles Bulb-type lectin domain profile. 45 165 IPR001480 -
Aip08g03092 842 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03092 842 Gene3D Hepatocyte Growth Factor 363 443 - -
Aip08g03092 842 CDD PAN_AP_plant 359 447 - -
Aip08g03092 842 ProSiteProfiles EGF-like domain profile. 307 343 IPR000742 -
Aip08g03092 842 SMART ntp_6 367 446 IPR003609 -
Aip08g03092 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 202 IPR036426 -
Aip08g03092 842 CDD B_lectin 56 171 IPR001480 -
Aip08g03092 842 Gene3D Phosphorylase Kinase; domain 1 486 600 - -
Aip08g03092 842 Pfam D-mannose binding lectin 94 197 IPR001480 -
Aip08g03092 842 Pfam S-locus glycoprotein domain 230 341 IPR000858 GO:0048544
Aip08g03092 842 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 54 841 - -
Aip08g03092 842 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
Aip08g03092 842 SMART blect_4 51 171 IPR001480 -
Aip08g03092 842 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 54 841 - -
Aip08g03092 842 Gene3D - 38 168 IPR036426 -
Aip08g03092 842 Pfam PAN-like domain 362 432 IPR003609 -
Aip08g03092 842 Pfam Protein tyrosine and serine/threonine kinase 526 793 IPR001245 GO:0004672|GO:0006468
Aip08g03092 842 CDD STKc_IRAK 531 796 - -
Aip08g03092 842 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03092 Aip-Chr8 120872675 120881260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03092 452 822 Receptor kinase-like Gene Family AT4G23190 50.789 9.12e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g03092 PK_Tyr_Ser-Thr 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03092 - - aip:107612694 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03092 08 120872675 120881260 Aip08g03092 08 120872675 120881260 ECH