Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03078 ATGGGTACCTTGGTGTTATTGGTTATCATGCTTTTGTGTGAAGTGTGTTTGGGAGGTGTCCAATTTGTTGGTAAGGTGTATCCAGGATCCATCAAAGGTGCTCAAATGAACTGGGTTGATAAGGATGGCAAGTTCCTTGCATCAAGCAGTGGGAAATTCACCTTTGGATTTGCCACCACTGCTGATGATATTACAAAGTTCCTAGTAGTGATTGTTCATGTTAAGAGCAACACTCTGATCTGGACTGCAAATCGAGCAGTCCCCATTGCAAATACTGACAAATTTGAGTTTGATGAAAAGGGAAATGTCGTCTTGAATAAGGGTGAAACAGTTGTGTGGTCTACAAACACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGCAAGACAATGGAAATTTGGTGTTGCTTGGAAAGGATAATACAACAATTATATGGCAGAGTTTCAATTATCCAACAAATACATTGTTGCCAGGACAGAACTTCACAGAGGGAATGAAACTAGTCAGTGATCCTAGCCCCAACAACTTGACCTATTCTCTTGAGTTCAATTCAGGAGATGTCAAACTCTATGCTGGTTTCAAGACTCCTCAGCCTTATTGGTCTACGCAGAGTGATAATCGCATGATCATCAATCAAAATGGCGGTGTGGTGGCTTTGGCAACGCTTGCCGAAAAATCGTGGAGGTTCTATGACAAGAGCAGGGTTTTTTTGCGGCAATTCATTTTTGTTGATCTTTCAGGTAATAATGGCACTTGGGTTGCTGTCTTGGGTTCAAATGGGTTAATCACTTTCTTTGATCTTGAAGCCGGAGGATCGAATTCGCCTTCCCAGGCAACAATACCACAAGGATCTTGCAATACGCCTGAAACTTGTGATCCATATAGCATCTGCACAGGGAACAATAAGTGTAACTGCCCTTCTGTTCTGCCTTGCAAGCCAGGTTTCGACTCTGCCTGCAGCGATAAATCCATCACTTTGATGAAAGGTGATGATGGACTCAATTACGTTGCGCTCCAATTTCTTAAGCCGTTTTCGAAGACCAATTTGGAAGGTTGCCAAAAATCTTGCAACGGAAATTGCTCATGCCTTGCCATGTTCTTCCACCTTAGTTCAGGAAACTGTTTCCTATTGGATGACATAGGTAGTTTTCAGAAACCTAGCACTGATTCTGGTTATGTTTCTTACATCAAAATCTCTAGTGATGGAAGAGGTAGTAGCAACGGGGGTGGTGGAAGTAGCAATAAGCACACTATAGTCACAGTGATCATTGTCATAGTAACACTGCTTGTGATTTCTTGCTTGCTCTTTGTGGGAATTAGGTGCTACCGGAGGAAGCCAAATGTACCCGAGTCACAAGAGGAGAATTCGGAAGAGGACAACTTCTTGGAGAATCTAACAGGTATGCCAATCCGTTACAGCTACAAGGATCTAGAAGCTGCTACAAATCACTTCTCTGTAAAGCTTGGACAAGGCGGTTTCGGCTCGGTTTACAAAGGAGTGCTACCAGATCGGACTCAAGTAGCAGTGAAGCAGTTGGAAGGTATTGGCCAAGGGAAGAAAGAGTTTAGAGCTGAAGTAAGCATCATTGGAAGCATCCATCACGTGCATTTGGTTAAGCTCAGAGGATTCTGTGTTGAAGGTACTAACAGGCTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGACAAATGGATATTCAAGAAGAACAATGGTGAGTTTCGGTTGGATTGGGATACAAGGTTCAACATAGCGCTCGGCACAGCAAAAGGTCTCGCTTACCTTCACGAAGATTGCGACTCAAAGATCATCCATTGTGACATCAAGCCGGAAAATGTGCTTCTAGATGATCATTTCATGGCAAAAGTATCCGATTTTGGCCTGGCTAAGCTCATGAACAGAGAACAAAGCCATGTCTTCACAACACTAAGAGGAACTCGAGGGTACCTCGCCCCCGAGTGGATAACAAACTACGCCATATCAGAGAAGAGTGATGTTTACAGCTACGGAATGGTGCTGCTAGAGATCATCGCCGGAAGGAAGAACTATGATCCATCTGAAACCTCAGAGAAATCACATTTCCCAAGCTACGCTATGAAGATGATGGAAGAAGGGAAACTGAGGGAAATCCTTGACTCAGAGTTGAAAGAAGATGTAAATGATGAAAGGGTTCATATAGCTATAAAAGTTGCATTGTGGTGCATACAAGAAGACATGGCAATGAGGCCTTCAATGACCAAAGTAGTGCAAATGCTGGAAGGTCTTTGCACTGTTCCTAAGCCACCAACAAGTTCTGCTAACCTGGGTTCTCGCCTTTTCACCAATGTCTTCAGTCTCAGTGAAGGAGCCACAACTTCTTCAGCTTCAGCTCAACAACACAAACCCCTAACCAATTTTCCCGCCAAATCACAACGCCCAACTTTCTCAACCGTTAATTTCCACCCCAACCACCCTCCTCCTCCTTCATCTTCAGGTCCAAATCTGGTGGTTGGAAGGAGAGGGCTAGTATCCATAGCCACTTTGCCATGTCTTGTTCCCCTGACTCAGATTATGGGTTGTCTCCAAGCATACGCTGCACAGCCTAGTACGAAGGAATATCTTCTAATTAAAGAAGAAGTAAGGAAGGTATTGTCGAAGGGAAAAGCTGCAGGCGTGCTTCGTTTGGTTTTCCATGATGCAGGAACCTTTGACATGGATGACAAGACAGGTGGTATGAATGGTTCTATAGTTTATGAACTTGAAAGACCTGAAAATTCTGGCCTAAAAAAATCAATAAAGGTTCTTCAGAAAGCAAAGATTCAAATAGATGCTATCCAACCAGTATCCTGGGGGGACATGATTGCTGTTGCTGGCGCCGAAGCAATCGAATTATGTGGAGGTCCATCAATCCAAGTTTCTTTGGGCAGACTAGATTCACTGGGGCCTGACCCTGAAGGTAAACTTCCTGAGGAATCTCTCAGTGCTTCCAGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAATGCATATTATAAGATTCTTTTGGAGAAGCCTTGGGCAAATCCAGGTGGCATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATAACGAATGCTTAAGATGGATCAAGAAATACGCAGAAAATGAGAACATATTCTTTGAAGATTTCAAGAATGCATATGTCAAGCTGgccttctccgtccctgtccttacccaAGATCTTAAAAAGCTCGCCGCCGACAAGGCCGTCGATTACGTCAAGTCCAGCATGGTCCTCGGCCTTGGCACCGGCTCCACCATTGCTTCGTCGTCGCCAAGCTCGGTCATCTCCTCTCCACCGAGTAAAAGGCTGCGGCGGCACTCTTCTCCGCGAGAAGATGGTGGAGGCTGCCCCGACAAGTTTGTTGTGGTGGTCAACGAAACGAAGCTCGTGTCAGGGCTTGGCGCGCCTCCCAAACATGTTCGTCGTATGCCTTTCCCAAAGGCCGTCAACCGCCGCGTCCATCCACATGCAAGTAACCACCGGCGTCGGAAGCTCACCCTAAACCGCCGCAACGCCTCCATCCCGTCCACGTGCTACCAGCCGCGTTCGTCAGAAGTTCGGCCCAGACCGCCGCAGCGCCTTCATGCCGCCCATGTGCGAGCAACCAAGGGCGTCTGA 3732 0.4523 MGTLVLLVIMLLCEVCLGGVQFVGKVYPGSIKGAQMNWVDKDGKFLASSSGKFTFGFATTADDITKFLVVIVHVKSNTLIWTANRAVPIANTDKFEFDEKGNVVLNKGETVVWSTNTSGKGVSSMELQDNGNLVLLGKDNTTIIWQSFNYPTNTLLPGQNFTEGMKLVSDPSPNNLTYSLEFNSGDVKLYAGFKTPQPYWSTQSDNRMIINQNGGVVALATLAEKSWRFYDKSRVFLRQFIFVDLSGNNGTWVAVLGSNGLITFFDLEAGGSNSPSQATIPQGSCNTPETCDPYSICTGNNKCNCPSVLPCKPGFDSACSDKSITLMKGDDGLNYVALQFLKPFSKTNLEGCQKSCNGNCSCLAMFFHLSSGNCFLLDDIGSFQKPSTDSGYVSYIKISSDGRGSSNGGGGSSNKHTIVTVIIVIVTLLVISCLLFVGIRCYRRKPNVPESQEENSEEDNFLENLTGMPIRYSYKDLEAATNHFSVKLGQGGFGSVYKGVLPDRTQVAVKQLEGIGQGKKEFRAEVSIIGSIHHVHLVKLRGFCVEGTNRLLAYEYMANGSLDKWIFKKNNGEFRLDWDTRFNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIAGRKNYDPSETSEKSHFPSYAMKMMEEGKLREILDSELKEDVNDERVHIAIKVALWCIQEDMAMRPSMTKVVQMLEGLCTVPKPPTSSANLGSRLFTNVFSLSEGATTSSASAQQHKPLTNFPAKSQRPTFSTVNFHPNHPPPPSSSGPNLVVGRRGLVSIATLPCLVPLTQIMGCLQAYAAQPSTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDMDDKTGGMNGSIVYELERPENSGLKKSIKVLQKAKIQIDAIQPVSWGDMIAVAGAEAIELCGGPSIQVSLGRLDSLGPDPEGKLPEESLSASSLKKCFQRKGFSTQELVALSGAHTLGSKGFGSPTSFDNAYYKILLEKPWANPGGMSSMIGLPSDHALVEDNECLRWIKKYAENENIFFEDFKNAYVKLAFSVPVLTQDLKKLAADKAVDYVKSSMVLGLGTGSTIASSSPSSVISSPPSKRLRRHSSPREDGGGCPDKFVVVVNETKLVSGLGAPPKHVRRMPFPKAVNRRVHPHASNHRRRKLTLNRRNASIPSTCYQPRSSEVRPRPPQRLHAAHVRATKGV 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03078 1243 Gene3D Transferase(Phosphotransferase) domain 1 557 762 - -
Aip08g03078 1243 Gene3D - 36 149 IPR036426 -
Aip08g03078 1243 ProSiteProfiles PAN/Apple domain profile. 319 400 IPR003609 -
Aip08g03078 1243 Pfam Protein kinase domain 485 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03078 1243 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 784 - -
Aip08g03078 1243 MobiDBLite consensus disorder prediction 1123 1155 - -
Aip08g03078 1243 MobiDBLite consensus disorder prediction 1123 1140 - -
Aip08g03078 1243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Aip08g03078 1243 Gene3D - 1094 1127 - -
Aip08g03078 1243 SMART serkin_6 482 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03078 1243 SUPERFAMILY NagB/RpiA/CoA transferase-like 1096 1125 IPR037171 -
Aip08g03078 1243 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 203 IPR036426 -
Aip08g03078 1243 ProSitePatterns Peroxidases active site signature. 882 893 IPR019794 GO:0004601
Aip08g03078 1243 SUPERFAMILY Heme-dependent peroxidases 872 1089 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 MobiDBLite consensus disorder prediction 1212 1243 - -
Aip08g03078 1243 Gene3D - 870 1088 - -
Aip08g03078 1243 CDD B_lectin 39 151 IPR001480 -
Aip08g03078 1243 SUPERFAMILY Protein kinase-like (PK-like) 463 753 IPR011009 -
Aip08g03078 1243 Gene3D Peroxidase, domain 2 982 1084 - -
Aip08g03078 1243 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
Aip08g03078 1243 MobiDBLite consensus disorder prediction 798 827 - -
Aip08g03078 1243 ProSiteProfiles Protein kinase domain profile. 482 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g03078 1243 MobiDBLite consensus disorder prediction 798 812 - -
Aip08g03078 1243 CDD STKc_IRAK 488 755 - -
Aip08g03078 1243 Pfam D-mannose binding lectin 78 162 IPR001480 -
Aip08g03078 1243 ProSiteProfiles Plant heme peroxidase family profile. 882 1088 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 940 958 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 998 1019 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 1068 1092 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 959 971 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 980 997 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 882 897 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Plant ascorbate peroxidase signature 900 910 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 Gene3D Phosphorylase Kinase; domain 1 447 556 - -
Aip08g03078 1243 Pfam Peroxidase 871 1072 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 ProSitePatterns Peroxidases proximal heme-ligand signature. 1004 1014 IPR019793 -
Aip08g03078 1243 CDD PAN_AP_plant 344 398 - -
Aip08g03078 1243 PRINTS Haem peroxidase superfamily signature 882 896 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Haem peroxidase superfamily signature 941 958 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Haem peroxidase superfamily signature 959 971 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PRINTS Haem peroxidase superfamily signature 1004 1019 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g03078 1243 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 784 - -
Aip08g03078 1243 SMART blect_4 37 151 IPR001480 -
Aip08g03078 1243 SUPERFAMILY WD40 repeat-like 112 332 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03078 Aip-Chr8 120543474 120553529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03078 425 764 Receptor kinase-like Gene Family AT5G20050 45.682 3.45e-90 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip08g03078 Pkinase 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03078 - - gmx:100791158 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03078 08 120543474 120553529 Aip08g03078 08 120543474 120553529 ECH
Aip06g03366 06 130442693 130447458 Aip08g03078 08 120543474 120553529 ECH
Aip06g03366 06 130442693 130447458 Aip08g03078 08 120543474 120553529 PCT