Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03071 ATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGCAAGAGACAGTGAAATTGCAATGGGTGCATTCCAACCATACCACTTAGCATCAAATAATAAGCAACCAAAGGGTCAAATCTATGGTTTCAGGCTTTCATTATGGCATGAACATCTTGGTGACACAAAAGACAAAAGAATCTTGTTAGACAATCCAGAGAGTTTGGAATGCATCAAGCTTGTGAACAATCTTGCTGACACAAATTGGGACATATATTCAAAGGAGAATTTTGATGAGAAAAGACCCTTTCACCATCTCATGAAGTACCCTATTGAGGTATCCAACAATGGAACCATAACAACACTTCAAGGGTTTGAACATTTTCCTGATACCAATGCTAAGATTCTTGGTACCAAATCAGATTACCTTCCACCAATTCTCACCACCTAA 480 0.375 MIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASNNKQPKGQIYGFRLSLWHEHLGDTKDKRILLDNPESLECIKLVNNLADTNWDIYSKENFDEKRPFHHLMKYPIEVSNNGTITTLQGFEHFPDTNAKILGTKSDYLPPILTT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03071 159 SMART pld_4 1 27 IPR001736 GO:0003824
Aip08g03071 159 Pfam Phospholipase D Active site motif 1 27 IPR001736 GO:0003824
Aip08g03071 159 SUPERFAMILY Phospholipase D/nuclease 2 74 - -
Aip08g03071 159 Gene3D Endonuclease Chain A 1 43 - -
Aip08g03071 159 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Aip08g03071 159 PANTHER PHOSPHOLIPASE D ALPHA 3 1 159 - -
Aip08g03071 159 Pfam Phospholipase D C terminal 79 149 IPR024632 -
Aip08g03071 159 PANTHER PHOSPHOLIPASE D 1 159 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03071 Aip-Chr8 120435993 120437223 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03071 1 159 Phospholipase D Gene Family (Wang group) AT3G15730 66.875 3.24e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03071 K01115 - gmx:100791688 249.21