Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03070 ATGCCTTATCTTCATTCTCAAAAGCGTGGTAAAAAAAACATGGTGCATTTGCTGCATGGGAAGCTAGATGTGAGTATATATGAGATTGACAAGCTGCAAAATCCTAAGGGCATAAGTGCAAACCTGGGGAAGAAATGTCTTACCCAACTCAGGAACATTTTTCTCTGCCATTGTCAACCAGAGGTTCTTCCATTGGGTCTATATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGGAGAACAAGAATGATAGATGATCAACCAACAAATCCACATTGGAATGAGAAGTTTCACATATATTGTGCACACTTGATCTCACACATTATATTCACTGTCAAACAAGATAACCCTATTGGGGCAACCCTAATTGGAAGAGCTTATGTCCCAGTTGAACAACTCATTAATGGCAACATTGTTGATACTTGGGCTGAAATACTTGATGAACAACATCATTCTATACAAGGTGGGTCTAAAATCCATGTTAGAATTCAATACTTTGATGTCAAGAATGATTCAAATTGGTCTCAAGGACTAAAGAGTCCACAGTTTCAAGGAGTTCCACACACCTTCTTCAACCAAAAATCTGGCTGCAAAGTTACTCTCTACCAAGATGCACATGTCCAGGACAATTTTTCGCGGCCGATGGCGCCATCCGAAAGAAAATTCTATGAGCCTGCAAGATGCTGGAAAGATATCTACAATGCAATAATTGATGCTAAGCATTTCATTTACATAACTGGTTGGTCTGTTTACACTGAGATAAGTTTGGTTAGGGATCAAAACCAAAGGAATTCAAGTATCAAACTTGGTGAGCTTCTTAAAAAGAAAGCAAATGAAGGTGTCAAGGTTCTAATGCTTGTTTGGGATGATAGAACTTCTGTTCCGGATTTCAAGAAAGATGGTTTGATGGCAACACATGATCAAGAAACAGAACAGTACTTTAAGGACACAGATGTTCATTGCATCTTGTGTCCGAGGAATCCGGACGATGGAAGAAGCATTGTTCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAGAAGAGTGTGATTCTTGATGGCCAAGTTGAGGGAGAATCGAAGAAGCGAAGTGTAGTGAGTTTCATTGGTGGAATTGATCTATGTGATGGAAGATATGATACTCAGGAACATCCTCTGTTTTCCACTTTGAACAATGTCCACCATGATGATTTCCATCAGCCGAATTTCCCCGGCGCTTCCATAAAGAAAGGCGGTCCGAGAGAGCCGTGGCATGACATTCATTGCAAGCTAGAAGGGCCGGTAGCATGGGATGTTATGCACAATTTTCAGCAGAGGTGGGAGAAGCAAGTTGGGAAGATTCTCCTATTCTCTTCTAGCATGCTAGATGATTTTCTTGTGCCTCAAGCAACCTCGGCGAAGTTCAATGATGAAGAGGGTTGGAATGTTCAAGTGTTTAGGTCTATTGATGGTGGTGCTGCTTCAGGATTCCCTGAAGATCCAGAGGAAGCTTGTGAAAGAGGACTTGTTAGTGGAAAAGATAACATCATTGATAGAAGCATTCAAGATGCATACATCAACGCGATTCGTCGAGCGAAGAATTTCATCTACATTGAGAATCAGTACTTTCTAGGGAGTTCATATGGTTGGAAATCATCTGACATAAAAGTTGAGGATATTAATGCTTTGCATCTTATACCAAAAGAACTTTCTCTAAAGATTGTTAGCAAGATTGAAGCAGGGGAGAGGTTTTCAGTCTATGTTGTGATTCCAATGTGGCCGGAAGGAGTGCCGGAGAGTGGCTCGGTTCAAGCAATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTATGCTGATATTGCTGAAGCCATTAGAAGGAAGAGAGCCTGGCAGTGA 1881 0.411 MPYLHSQKRGKKNMVHLLHGKLDVSIYEIDKLQNPKGISANLGKKCLTQLRNIFLCHCQPEVLPLGLYATVDLDKARVGRTRMIDDQPTNPHWNEKFHIYCAHLISHIIFTVKQDNPIGATLIGRAYVPVEQLINGNIVDTWAEILDEQHHSIQGGSKIHVRIQYFDVKNDSNWSQGLKSPQFQGVPHTFFNQKSGCKVTLYQDAHVQDNFSRPMAPSERKFYEPARCWKDIYNAIIDAKHFIYITGWSVYTEISLVRDQNQRNSSIKLGELLKKKANEGVKVLMLVWDDRTSVPDFKKDGLMATHDQETEQYFKDTDVHCILCPRNPDDGRSIVQGFEISTMFTHHQKSVILDGQVEGESKKRSVVSFIGGIDLCDGRYDTQEHPLFSTLNNVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVMHNFQQRWEKQVGKILLFSSSMLDDFLVPQATSAKFNDEEGWNVQVFRSIDGGAASGFPEDPEEACERGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSSDIKVEDINALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGVPESGSVQAILDWQRRTMEMMYADIAEAIRRKRAWQ 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03070 626 Pfam C2 domain 20 144 IPR000008 -
Aip08g03070 626 PANTHER PHOSPHOLIPASE D 15 623 IPR015679 -
Aip08g03070 626 SMART C2_3c 21 142 IPR000008 -
Aip08g03070 626 PANTHER PHOSPHOLIPASE D ALPHA 3 15 623 - -
Aip08g03070 626 ProSiteProfiles C2 domain profile. 2 143 IPR000008 -
Aip08g03070 626 Gene3D Endonuclease Chain A 477 624 - -
Aip08g03070 626 Pfam Phospholipase D Active site motif 342 379 IPR001736 GO:0003824
Aip08g03070 626 Gene3D C2 domain 18 178 IPR035892 -
Aip08g03070 626 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 342 379 IPR001736 GO:0003824
Aip08g03070 626 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 168 IPR035892 -
Aip08g03070 626 CDD C2_plant_PLD 17 166 - -
Aip08g03070 626 Gene3D Endonuclease Chain A 211 459 - -
Aip08g03070 626 SUPERFAMILY Phospholipase D/nuclease 515 613 - -
Aip08g03070 626 SUPERFAMILY Phospholipase D/nuclease 171 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03070 Aip-Chr8 120430640 120435961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03070 16 620 Phospholipase D Gene Family (Wang group) AT3G15730 65.846 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03070 K01115 - gmx:100791688 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03070 08 120430640 120435961 Aip08g03070 08 120430640 120435961 ECH