Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03069 ATGAGAAAAGGTTGTAAGGTTACACTATACCAAGACGCTCACGTTCTTCGTGGCGCACTACCTTGGATTCCGTTAACCGTAGGGAGATACTATGATGAGCCTCCACGGTGTTGGGAAGATATTTACAATGCTATCAGGAATGCGAATCATTTGATTTACATAACCGGTTGGTCGGTTTATACCGAGATAACGTTGGTTAGGGACAAAACGACAGGACCTAGTGTCGTTACGCTTGGGGAGCTTCTTAAGGACAAAGCGGATGAGGGTGTTCGAGTTCTTATGCTTGTTTGGGACGATAGATCTTCCGTGCCGCAGTTTAAGAAAGATGGGTTAATGGGAACCCATGATCAAGAAACAGAACAGTATTTTAGGAATACTAAGGTGAAATGTTTTCTTTGTCCGCGAAATCCTGATGATGGAAGAACCATTGTTCAGGGGATTCAGACCTCAGCAATGTTCACCCATCATCAGAAAAGCGTGGTTGTTGATGGCAATGTCGAAGGGAATACTAAAAGAGGGATCGTAAGTTTTATTGGCGGGATTGATCTTTGTGATGGAAGATATGATACTCAAGATCACCCTTTGTTTTCGAGTCTAAATACTGTCCACCGTGATGACTTCCATCAACCGAATTTCCCCGGCGCTTCGATCAAGAAAGGCGGCCCGAGGGAGCCGTGGCATGACGTGCATTGCAAGTTAGAAGGACCGGTTGCTTGGGATGTGTTGTACAATTTTGAACAGAGGTGGGAGAAGCAAGTTGGGAAGAATCAAAACCTGTTATTCACACTTGATGAGCTTGATCAAATTGTTGTGCATCCAAGTGAGGCTGCTGCTACATTGGAAGAAGACAGGGATTGTTGGAATGTTCAGTTGTTTAGGTCGATCGATGGCGGCGCAGTTTATGGATTCCCACAAAACCCTGAAGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATGTGATAGATAGAAGCATTCAAGATGCATACATTCATGCGATTCGGCGTGCCAAGGATTTCATCTACATTGAGAATCAGTACTTCCTAGGGAGTTCATATGGTTGGAAATCATCTGATATACGAGTTGAGGATATTAATGCCTTGCATCTTATACCAAAGGAGCTTTCACTCAAGATTTGTAACAGCATTGAAGCAGGACAAAGGTTTGTTGTGTATGTTGTGATTCCGATGTGGCCGGAAGGTGTGCCTGAAAGTGCTTCAGTTCAGGCAATTTTGGACTGGCAGAGAAGGACTATGGAGATGATGTATAGTGACATTGCTGAGTCCATAGAGAAGAAGGGGATTGAAGCACATCCTAGGGATTATTTGACATTTTTTTGCCTTGGGAAGAGGGAGCCTAAGATGGAAGGTGAATATGTTCCTACACAACAACCTGAACCTGATAGTGACTATATAAGAGCGCAGAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGGGGAAGAGACACAGAGATAGCAATGGGAGCATTCCAACCACACCAAAGAGTGCCACGTGGCACCAAACCAGAGGGCCACGTGCATGCATTCAGAAGAGCCCTATGGTACGAACACCTAGGGGACCCACTTGCACTGGACGAGGTTTTCAACCGACCAGAGAGTGAGGAGTGTGTGAAGCTTGTGAACCATCTTGCTAAGAAGAATTGGGATTTGTACACTCAAGATGAGTTTGATGTTAACACACCACTTCATCACTTGTTGCAGTACCCTGTACACGTGGCAAGTGATGGTACCATAACAACGTTGCCTGGCTTTGAATGTTTTCCGGATACTAAGGCCCATGTTCTTGGATCAAAATCTGAGTACCTTCCTCCAATACTCACCACCTAG 1923 0.4436 MRKGCKVTLYQDAHVLRGALPWIPLTVGRYYDEPPRCWEDIYNAIRNANHLIYITGWSVYTEITLVRDKTTGPSVVTLGELLKDKADEGVRVLMLVWDDRSSVPQFKKDGLMGTHDQETEQYFRNTKVKCFLCPRNPDDGRTIVQGIQTSAMFTHHQKSVVVDGNVEGNTKRGIVSFIGGIDLCDGRYDTQDHPLFSSLNTVHRDDFHQPNFPGASIKKGGPREPWHDVHCKLEGPVAWDVLYNFEQRWEKQVGKNQNLLFTLDELDQIVVHPSEAAATLEEDRDCWNVQLFRSIDGGAVYGFPQNPEEVAELGLVSGKDNVIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSYGWKSSDIRVEDINALHLIPKELSLKICNSIEAGQRFVVYVVIPMWPEGVPESASVQAILDWQRRTMEMMYSDIAESIEKKGIEAHPRDYLTFFCLGKREPKMEGEYVPTQQPEPDSDYIRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHQRVPRGTKPEGHVHAFRRALWYEHLGDPLALDEVFNRPESEECVKLVNHLAKKNWDLYTQDEFDVNTPLHHLLQYPVHVASDGTITTLPGFECFPDTKAHVLGSKSEYLPPILTT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03069 640 PANTHER PHOSPHOLIPASE D ALPHA 3 2 640 - -
Aip08g03069 640 SMART pld_4 151 187 IPR001736 GO:0003824
Aip08g03069 640 SMART pld_4 481 508 IPR001736 GO:0003824
Aip08g03069 640 Gene3D Endonuclease Chain A 26 281 - -
Aip08g03069 640 PANTHER PHOSPHOLIPASE D 2 640 IPR015679 -
Aip08g03069 640 Pfam Phospholipase D C terminal 557 630 IPR024632 -
Aip08g03069 640 SUPERFAMILY Phospholipase D/nuclease 327 558 - -
Aip08g03069 640 SUPERFAMILY Phospholipase D/nuclease 13 262 - -
Aip08g03069 640 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 151 187 IPR001736 GO:0003824
Aip08g03069 640 Pfam Phospholipase D Active site motif 482 508 IPR001736 GO:0003824
Aip08g03069 640 Pfam Phospholipase D Active site motif 152 187 IPR001736 GO:0003824
Aip08g03069 640 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 481 508 IPR001736 GO:0003824
Aip08g03069 640 Gene3D Endonuclease Chain A 301 524 - -
Aip08g03069 640 CDD PLDc_pPLD_like_1 28 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03069 Aip-Chr8 120425399 120428259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03069 2 640 Phospholipase D Gene Family (Wang group) AT3G15730 66.460 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03069 K01115 - gmx:100791688 944.495