Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03068 ATGAAAATGCAGCAGCATCTGCTACATGGGACGCTTAGGGTAACAATATATGAAGCTGATAAGTTGCAAACGGGATGTAATTTGGATTTCTGTGCCAAGGGCACAACACACAAGGGGAAGAGATTCCTAGCCCAAGTCAAAGGATGTCTGCTGTGCAGGCCTGAGATTGTTGGAAGGAGACTATACGCAACAGTTGATCTAGACAAAGCAAGAGTTGGAAGAACAAGAATGATAGGAAACCAACCTTCACACCCTAAATGGAATGAAACATTTCAAATTTACTGCGCTCTTCATTCACTCCAAAGAACTCCTTCAAGGCCACATTGTTAG 330 0.4303 MKMQQHLLHGTLRVTIYEADKLQTGCNLDFCAKGTTHKGKRFLAQVKGCLLCRPEIVGRRLYATVDLDKARVGRTRMIGNQPSHPKWNETFQIYCALHSLQRTPSRPHC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03068 109 Gene3D C2 domain 6 105 IPR035892 -
Aip08g03068 109 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 96 IPR035892 -
Aip08g03068 109 PANTHER PHOSPHOLIPASE D 5 97 - -
Aip08g03068 109 Pfam C2 domain 10 96 IPR000008 -
Aip08g03068 109 PANTHER PHOSPHOLIPASE D 5 97 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03068 Aip-Chr8 120415217 120425253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03068 3 96 Phospholipase D Gene Family (Wang group) AT3G15730 48.515 4.83e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03068 K01115 - gmx:100794115 176.792