Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03041 ATGGCGGGAGCTACAGCAAGAACCCTCTTCTTCACCATCTTTCTCTCTTCCTCCTCCTTCACGCACCTCTCTCGTCGCTCCAATCTTATCCCACTCCTCACGCGCTCTAAGCCCATCATCAATGTTCCGCCGCCACGGTTCAGGACCTTCTGTTCCATTGCCACCGCTCTGGAAACTTCGAAAACTGATCACCAGACGAAGCACTCCATCCTCCTTGAGAAGCTCAGATTGAGACATCTCAAGGACAGTGCAAAGAGCTCAGAACTCAAGAATAAGGACCAAACAAAGAAGAATTCTTCTTCTTCTTCTGGTGAAAGTGAGAATTTTGATGGGGTGGTGGTGAAAAAGAATAAACTTTTTGGGAGTTTTGAAGAATTGGGTTTGAGTGAAGAGGTTATGGGTTCTGTTCGGGAAATGGGCATTGAAGTTCCCACTGAGATTCAGTGTATTGGTGTTCCTGCTGTCTTGCAAGAGAGTAGTGTTGTGTTGGGTTCTCACACTGGCTCTGGCAAAACCCTTGCTTACTTGCTTCCCCTTGTTCAAGGCATTGTACATCTGCGAACATCAACATTTCATAAAAAGATTTCTTCTGCTTGTCACGATTTTATTAAACTTTCGAGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTATCCTGCATTTTTCCACCAGTCTCATCAAGCCAAACACATTGA 696 0.4511 MAGATARTLFFTIFLSSSSFTHLSRRSNLIPLLTRSKPIINVPPPRFRTFCSIATALETSKTDHQTKHSILLEKLRLRHLKDSAKSSELKNKDQTKKNSSSSSGESENFDGVVVKKNKLFGSFEELGLSEEVMGSVREMGIEVPTEIQCIGVPAVLQESSVVLGSHTGSGKTLAYLLPLVQGIVHLRTSTFHKKISSACHDFIKLSSSENKLEALLQVSCIFPPVSSSQTH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03041 231 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 45 181 - -
Aip08g03041 231 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 181 218 - -
Aip08g03041 231 MobiDBLite consensus disorder prediction 83 108 - -
Aip08g03041 231 Gene3D - 74 214 IPR027417 -
Aip08g03041 231 Pfam DEAD/DEAH box helicase 145 186 IPR011545 GO:0003676|GO:0005524
Aip08g03041 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 188 IPR027417 -
Aip08g03041 231 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 45 181 - -
Aip08g03041 231 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 181 218 - -
Aip08g03041 231 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 121 149 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03041 Aip-Chr8 119674517 119676045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03041 122 181 Eukaryotic Initiation Factors Gene Family AT3G19760 36.667 9.33e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03041 - - thj:104806769 153.68