Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03035 ATGAGAAGGCGTGGAAAGAAGGTATTTGCAAGATTGTGTGGTGGTGCCCGTGGTGGTGACGACGACGAGGACGAAGAAGACACCTTTCCTGAGAGCCAAAGGAGGGATCACATTGCGGAGTTTGATTATGAAGGAAGCCAATACAGCCTCGCCGGTCTTCCTCTTCCCTCGCTCGGCTCCACTTCCCACAGACTCAAGCTCCGTCCTTACATTGTTTCTCCCTTCAACCACAATTACAGACTTTGGCAGACATTTCTGGTGTTCTTGGTGTTCTATAATGCATGGGTTTGTCCCTTTGAATTTGCATTCCTTAACCAAAAAATGGTCGCAATCTTCGTAGCTGACAATGTTGTCAATGGATTCTTTGCTGTTGACATTGTTCTCACCTTCTTTGTTGCATACCTAGACAAGACTACCTATTTGCTAGTTGATGATAAAAGCCTAATTGCTTTGAGGTATGCCAAATCATGGTTGGCTTTAGATGTCATCTCCACTATCCCCTCTGAAGTTGCTCATAGGTTTTTGCCCGCTGCCCTGAAAAAATATGCTTACTTCAACATGCTTCGCCTTTGGCGTCTTCGCCGAGTCAGTGCCTTGTTTGCAAGATTAGAGAAGGACAGGCATTATAATTACTTCTGGGTTCGCTGCTCAAAACTGATCTGTGTTACATTATTCGCAGCTCATTTTGCTGCTTGCATTTTCCATTTTATCACTCTGAATCGTGAAACCGGACAAACATGGCTTTCGCTTCTTCCGGAAGTCGATGATCATAGTGTCACAAATCTCTATATAGCATCAATTTACTGGTCCATAGCAACTCTTACAACGGTTGGTTATGGAGATCTACATCCTACGAACACAAGGGAGACTCTTTTTGATACTTTCTATATGCTCTTCAATCTTGGGCTAACTGCATATCTCATAGGTAACATGACAAATTTGGTCGTTCATGGGACAAGCAGAACTAGGAAATATAGAGACACAATTCAAGCTGTGACAAGTTTTGCCAAACGGAATAAATTGCCTGTTCTCATGCAAGAACAGATGATTGCACATTTGCATATGAAGTACAGAACTGATATAGAAGGGCTGCAGCAGCAAGAGATTATCGAATTACTCCCGAAAGCTATTCGTTCTAGCATCTCTCATTACCTATTCTATGAACTTTTGGAGGATATCTACTTGTTTAATGGGGTGTCACATGATCTGCTTTTTCAACTGGTCTCAGAGATGAAGCCCGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCACCAACAGACTTCTATGTATTGGTCACTGGTGCTGTGGTAGTTGGTGAGATAAAGGCAGGAGAATTAGTTGGAGAAGTTGGAGTTTTATGTTACAGGCCCCAGATGTTTACAGTTCGGACCAAACGATTGTGCCAACTTCTGCGCTTGAGCCGGACTACATTTATAAATCTTGCTCACTCCAATGTTGGAGATGGGACAATTATGATGAACAATTTTCTTAAGCATTTGCATGAATCCCAGGCACCAGGAATGGATATTATTTTCCGAGAGACAGAGGCCATGCTGGCACGTGGTAAATTGGATTTGCCTATCAGCACATGCTTTGCAGTAAACCGAAATGATGATATATTGTTGCAACGGCTGCTGAAGAAGGGTATGGATCCAAATGAAGGCGACCCAGATGGAAGGACACCGCTGCATATTGCAGCTTCTAAAGGCAATGAGAAGTGTATATCTGTGCTTCTGGAATATGATGCTGATCCCAACATCAGAGATAAGGAAGGAAATCTTCCACTGTTTGAAGCACTTATAAGTGGTAACGACTCCATTGTGAAACTCCTTCTGGAGCATGGTGCAGTGTTAGAACCTGCCGATGCAGGCCACCTGGCATGCATTGCTGTTGAGAAAAATAGCATGGAACTGCTCAATAGAATTTGTCAATATGGTTGGGATGTGACACAACCCACACACAATGGAACCACTGCTCTTCACACTGCAGTGTGTGAAGGAAACCTCCAAATGACAAAGTTCCTTGTCGAAAAAGGAGCCAACATTGATCTGCAAGACGCTACCGGCTGGACTCCAAGGACCTTGGCGGATCAACAAGACCATGATGAAATCAAAAGTATGTTTCAGAAGATTGGAGAGANCACTTGCCTAACCTTGGAAGAAGATATGTTCTTTGACAATACTAAAAGAAGAAGAAACAACAATTTTAACAATTCCATTTTTGGGATGATGTCGGCAGCTAACCATAATCAAAGAGAGCGTGAGGCATCCAAAAAATTTAACAATCATAGGTTGAACAAGGATGACTTTGTTGGCAGATTGACATTAAGTTGTCCTGAAAAGGGTGAACATGCTGGAAAGCTTGTTATGCTGCCAAATACCATTCAGGAACTGCTAGATATTGGAGCTAAAATGTTTGACTTTACTGCTGTCAAAATTTTGACCAAAGAAGGAGCTGAAGTGGATGACATAAATCTCATAAGAGATGGTGATCATCTTATTATTGCACATAAATGA 2529 0.4227 MRRRGKKVFARLCGGARGGDDDEDEEDTFPESQRRDHIAEFDYEGSQYSLAGLPLPSLGSTSHRLKLRPYIVSPFNHNYRLWQTFLVFLVFYNAWVCPFEFAFLNQKMVAIFVADNVVNGFFAVDIVLTFFVAYLDKTTYLLVDDKSLIALRYAKSWLALDVISTIPSEVAHRFLPAALKKYAYFNMLRLWRLRRVSALFARLEKDRHYNYFWVRCSKLICVTLFAAHFAACIFHFITLNRETGQTWLSLLPEVDDHSVTNLYIASIYWSIATLTTVGYGDLHPTNTRETLFDTFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTIQAVTSFAKRNKLPVLMQEQMIAHLHMKYRTDIEGLQQQEIIELLPKAIRSSISHYLFYELLEDIYLFNGVSHDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYVLVTGAVVVGEIKAGELVGEVGVLCYRPQMFTVRTKRLCQLLRLSRTTFINLAHSNVGDGTIMMNNFLKHLHESQAPGMDIIFRETEAMLARGKLDLPISTCFAVNRNDDILLQRLLKKGMDPNEGDPDGRTPLHIAASKGNEKCISVLLEYDADPNIRDKEGNLPLFEALISGNDSIVKLLLEHGAVLEPADAGHLACIAVEKNSMELLNRICQYGWDVTQPTHNGTTALHTAVCEGNLQMTKFLVEKGANIDLQDATGWTPRTLADQQDHDEIKSMFQKIGEXTCLTLEEDMFFDNTKRRRNNNFNNSIFGMMSAANHNQREREASKKFNNHRLNKDDFVGRLTLSCPEKGEHAGKLVMLPNTIQELLDIGAKMFDFTAVKILTKEGAEVDDINLIRDGDHLIIAHK 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03035 842 MobiDBLite consensus disorder prediction 13 32 - -
Aip08g03035 842 PANTHER POTASSIUM CHANNEL AKT1 730 841 IPR045319 GO:0005249|GO:0006813
Aip08g03035 842 PANTHER POTASSIUM CHANNEL AKT1 37 718 IPR045319 GO:0005249|GO:0006813
Aip08g03035 842 Gene3D - 80 316 - -
Aip08g03035 842 ProSiteProfiles Ankyrin repeat region circular profile. 595 620 - -
Aip08g03035 842 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 730 841 - -
Aip08g03035 842 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 37 718 - -
Aip08g03035 842 Pfam Ion transport protein 80 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip08g03035 842 SUPERFAMILY Ankyrin repeat 536 715 IPR036770 -
Aip08g03035 842 SMART cnmp_10 395 501 IPR000595 -
Aip08g03035 842 ProSiteProfiles Ankyrin repeat profile. 595 627 IPR002110 GO:0005515
Aip08g03035 842 CDD CAP_ED 395 497 IPR000595 -
Aip08g03035 842 SUPERFAMILY cAMP-binding domain-like 320 504 IPR018490 -
Aip08g03035 842 PRINTS Ankyrin repeat signature 675 689 IPR002110 GO:0005515
Aip08g03035 842 PRINTS Ankyrin repeat signature 563 578 IPR002110 GO:0005515
Aip08g03035 842 SMART ANK_2a 595 626 IPR002110 GO:0005515
Aip08g03035 842 SMART ANK_2a 562 591 IPR002110 GO:0005515
Aip08g03035 842 SMART ANK_2a 529 558 IPR002110 GO:0005515
Aip08g03035 842 SMART ANK_2a 659 688 IPR002110 GO:0005515
Aip08g03035 842 ProSiteProfiles Ankyrin repeat region circular profile. 659 690 - -
Aip08g03035 842 ProSiteProfiles cAMP/cGMP binding motif profile. 395 503 IPR000595 -
Aip08g03035 842 Pfam KHA, dimerisation domain of potassium ion channel 777 839 IPR021789 -
Aip08g03035 842 ProSiteProfiles KHA domain profile. 777 842 IPR021789 -
Aip08g03035 842 ProSiteProfiles Ankyrin repeat region circular profile. 562 594 - -
Aip08g03035 842 ProSiteProfiles Ankyrin repeat profile. 562 594 IPR002110 GO:0005515
Aip08g03035 842 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Aip08g03035 842 Gene3D Jelly Rolls 385 518 IPR014710 -
Aip08g03035 842 Gene3D Helix hairpin bin 318 384 - -
Aip08g03035 842 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g03035 842 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g03035 842 PRINTS EAG/ELK/ERG potassium channel family signature 126 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g03035 842 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g03035 842 Pfam Cyclic nucleotide-binding domain 414 488 IPR000595 -
Aip08g03035 842 SUPERFAMILY Voltage-gated potassium channels 74 316 - -
Aip08g03035 842 Gene3D - 531 714 IPR036770 -
Aip08g03035 842 Pfam Ankyrin repeats (3 copies) 536 621 IPR002110 GO:0005515
Aip08g03035 842 Pfam Ankyrin repeats (3 copies) 633 707 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03035 Aip-Chr8 119560049 119565880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03035 31 840 Ion Channels AT2G25600 54.026 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03035 K21867 - gmx:100802964 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03035 08 119560049 119565880 Aip08g03035 08 119560049 119565880 ECH