Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03034 ATGGGGAAGATGGGAACCCCATTTAAGGGAATAATTCAAGATGTAAAAGGAAGAGCTGAATGCTACAAGCAAGATTGGGTTTTGTCATTCTGCTCTGGTCTAAGATTATTGGCTCCAACATTCTACATATTCTTTGCTTCTGCTCTCCCTGTCATTGCTTTTGGAGAACAACTAAGTAGAGATACAGATGGAAGCTTGAGCACTGTAGAAGCATTGGCATCTACTGCAATTTGTGGAATTATTCACTCTATAATTGGTGGCCAGCCTTTGTTGATTGTAGGAGTTGCTGAACCAACTGTTATAATGTACAGTTATCTCTACAATTTCAGCAAGAAAACACCTGAACTTGGTGCAAAACTCTTTCTGCCTTGGGCTGGATGGGTTAATGTATGGAGTGCACTCTTCTTGATTGTGCTTGGGATTTTTAATGCTTGCACTGTGATCACGAGGTTTACAAGGGTTGCGGGGGAGTTGTTCGGCATGCTAATTACTGTTCTTTTCTTTCAACAGGCTATTAAGGGATTGGTTGAGGAGTTCGGCACGCCGAAGAATGAAAACCAGTTGGCAGAAGAGTTTCAATTCCAATGGAGGTACATTAATGGATTGCTTGGAATCATTTTCTCTTTTGGAGTACTTGTCACTTCCCTTAAAACCAGAAAAGCAAGAACATGGCTATATGGAACAGGGTGGCTACGAAGTTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTATGGACTGCACTGTCTTATGTTGTGCCAGGCAAAGTTCCCGAAGGTGTTCCTCGAAGGTTGGTTTCTCCGCTTCCTTGGGAATCTGCATCTCTGTATCACTGGACAGTAGTGAAGGATATGGGGCAGGTTCCTTTTCTTTACATAGTTGCGGCAATTATTCCGGCTTTCATGATAGCAGGACTATACTTTTTCGATCATAGTGTATCTTCCCAGATGGCTCAACAGGAGGAATTCAATCTTCAAAAGCCATCTGCCTATCACTATGATATGTTTCTGCTTGGAATAATGACTTTGATTTGCGGTCTTCTTGGCCTTCCTCCATCAAATGGAGTCATTCCGCAATCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGAAAGCAGTTGATCCGAAAGGAAGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTGAAAAAGACAAAGTCTGAAATATATGGCAAGATGCAGGCTGTCTTTGAAGAGATGGATACAGATCCTACTGCCAAAGAGTTGGAGAATTTGAAGGAAGCTGTAATGAACCCTGATGCCAAGGATGGTACAAAGAAAAATTTTGATCTTGAGGAGCACATAGATGACTATCTACCAGTCCGGGTTAATGAGCAAAGAATGACCAACTTAATGCAGTCCCTTCTGATTGGCCTCTCAGTTTTGGCCATCTCTATTATCAAAAGGATACCTACCTCGGTTTTATGGGGATATTTCGCTTACATGGCAATCGATAGTCTACCAGGGAATCAGTTTTGGGAAAGGATATTGCTTCTCTTCATCGCTCCAAGACGACGTTCTAGAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGCTTTTACCGGCTTCCAGTTAGCATATTTCGCAGTCTGTTATGGAATGACATGGATACCTATAGGTGGAATTTTGTTTCCACTACCATTCTTCCTTCTCATACTTGTAAGGGAGCACCTGCTTCCAAGACTCTTCAAACCTCGAGATCTTCAAGAACTAGACGCTTCCGAATATGAGGAGATTCTTGGTGCTCCACGCGGTTCCCTTAGTATGTCACTGCAGGATAAGGAACCGGGCAATAGCGATGAGAGTGTAGAAGATTATTGTGATGCTGAGATATTGGATGAGATGACAACCAGTAGGGGAGAGTTGAAACTCAGAGCTGTGAGCTTCAATGATGGGAACTCCAACAATGATGGAGATCGCAGTTTCAATGTTAGAAATCGCAGCTTCAATGTTAGAAATCGCCGCAGCTTCAATGCTAGATACCGCCACAGTTTCAATGATAGATACCTCCATAGCTTCAATGGAAATGCTGTTTGA 2088 0.4248 MGKMGTPFKGIIQDVKGRAECYKQDWVLSFCSGLRLLAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVEALASTAICGIIHSIIGGQPLLIVGVAEPTVIMYSYLYNFSKKTPELGAKLFLPWAGWVNVWSALFLIVLGIFNACTVITRFTRVAGELFGMLITVLFFQQAIKGLVEEFGTPKNENQLAEEFQFQWRYINGLLGIIFSFGVLVTSLKTRKARTWLYGTGWLRSFIADYGVPLMVVLWTALSYVVPGKVPEGVPRRLVSPLPWESASLYHWTVVKDMGQVPFLYIVAAIIPAFMIAGLYFFDHSVSSQMAQQEEFNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVIPQSPMHTKSLAVLRKQLIRKEVVKSAKECIKLKKTKSEIYGKMQAVFEEMDTDPTAKELENLKEAVMNPDAKDGTKKNFDLEEHIDDYLPVRVNEQRMTNLMQSLLIGLSVLAISIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPRRRSRILEGSHASFVETVPFKTIAAFTGFQLAYFAVCYGMTWIPIGGILFPLPFFLLILVREHLLPRLFKPRDLQELDASEYEEILGAPRGSLSMSLQDKEPGNSDESVEDYCDAEILDEMTTSRGELKLRAVSFNDGNSNNDGDRSFNVRNRSFNVRNRRSFNARYRHSFNDRYLHSFNGNAV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03034 695 PANTHER BORON TRANSPORTER-LIKE PROTEIN 4 667 - -
Aip08g03034 695 Gene3D Helical hairpin bin 18 60 - -
Aip08g03034 695 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Aip08g03034 695 Pfam HCO3- transporter family 201 374 IPR011531 GO:0006820|GO:0016021
Aip08g03034 695 Pfam HCO3- transporter family 449 539 IPR011531 GO:0006820|GO:0016021
Aip08g03034 695 PANTHER ANION EXCHANGE PROTEIN 4 667 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03034 Aip-Chr8 119554998 119558945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03034 7 652 Antiporters AT4G32510 66.313 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03034 K24194 - gmx:100787412 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03034 08 119554998 119558945 Aip08g03034 08 119554998 119558945 ECH
Aip06g03312 06 129648400 129651781 Aip08g03034 08 119554998 119558945 ECH
Aip06g03312 06 129648400 129651781 Aip08g03034 08 119554998 119558945 PCT