Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03031 ATGGACAACGGAGATATTCCTGAAAATGCCAACGAGCATTGTCCAGGTCCTCAGTCAGAATCTGCAGGAAAATCCGATGCATGTGAAGGATGCCCCAATCAACAAATTTGTGCCACCGCTCCCAAAGGACCTGACCCTGACCTAGTTGCTATCGCAGAAAGAATGGCTACTGTGAAGCATAAAATATTGGTCTTGTCAGGAAAAGGAGGAGTAGGCAAGAGCACATTTTCCGCCCAGCTGGCATTTGCTTTAGCAGCAATGGATTTTCAAGTGGGTCTTCTTGACATTGACATTTGTGGTCCAAGCATCCCTAAGATGCTCGGTCTAGAAGGTCAAGAGATACATCAGAGCAACCTCGGGTGGTCTCCTGTCTATGTGGAGTCCAACCTTGGTGTCATGTCAATTGGATTCATGCTTCCAAATCCTGATGATGCTGTTATATGGAGAGGCCCCCGCAAAAATGGGCTTATTAAGCAGTTTCTGAAAGACGTCTATTGGGGTGAGCTTGATTTCCTTATTGTTGATGCTCCTCCTGGTACCTCAGATGAGCACATTTCAATTGTTCAATGCCTTGATGCAACTGGAGTAGATGGTGCAATTATAGTCACCACTCCTCAGCAAGTCTCTCTTATTGATGTGAGAAAAGAGGTGAGTTTCTGCAAGAAAGTTGGAGTGAAAGTTCTTGGGGTAGTAGAGAATATGAGTGGCCTGTGCCAGCCCCTAATGGATTTTAAGTTCATGAAGTTGACGGATAATGGTGAGCAGAAAGATGTTACGGAATGGATATTGGGATACATGAGAGAAAAAGCACCAGAAATGCTGAATTTGATGGCATGCAGTGAAGTTTTCGATAGTAGTGGTGGTGGCGCAATGAAAATGTGCAATCAAATGGGGGTGCCTTTTCTCGGTAGGGTTCCACTAGATCCGCAACTTTGTAAGGCAGCTGAAGAAGGCAGGTCCTGCTTTGCTGATAAAGATTGTGTCGTGAGCGCTCCTGCATTAAAGAAGATTATAGAGAAGTTGATAGAAGCAAATGGGTTGTCAATGGCAGCTAGAGAAAAGAACAAAAACCCTTCAACCAGTGAAACGTTGAGCGTTGTCTTACCTAGAGGAAGAAGCAACGCCTACGACGACGGCAGTGATATCGGAGATGCCAAACCCTCCCGCAATATTCCGGTGGGATTAATCTCTGCAGCTGAGGGAGTTGGGAAGCAAGGCATGCACACGAGTTTCTTCTCTAAGTTTGGGAGAAGAGACCGAACAGTTTTCAAGAGGGAAAACCCTTTCACTATCCTTCCAAGTTCCGAAGTCCTGTCTGTTTATCACCCTCAACGCGGTCAACGCAACGCAACCGGAATGGGGAAGAAGAAGCAGAAGGAGAAGATAGTTCTTCCACCGGAGCTCCCGCCGGAGATTCCCGACGACGAGGTCGAGGTCTCCGATGAGGACCTCCAGTTCGTCAATGAGAATCGCGGTTACGCTTCCTTATTCTCCACCCTTGACACGCAATCAATCACCAAGCATGTTACTCGAGTTGCTGATGCTAAAGATGATGCTTTGGAGAAACTTTATGAGAAAAAGCTGCGAAAGAATGCTCTCAAGAAGGAAAAAGAAGAAACAGGAATACAGGTTGACCGAGTTGATGTTCTTCCAATCAAGTCTTTGGATGGACAACTCCATTACCGGACAGCTACAAAGGCAGAATCACAAAATGGTCCAAGTGAAGAGGAAACGGGAGAGGATGTAAATGATAGAAAAAGTCTGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAGAGGCCTATGGAATTAACTAAAAGTAATAAATGGCCAACAACCAGTTATTTTATCAATATTCTGATTTTCTTCCACTTGGCTGAGGTAAAAGAAGATCTTACAACTGAGGAGGCTTTTGAATCTAAGAAGTGTAAACTTGCAGAGTTGGGAAATGCATTACTTACAGACCCTGAGTCCAATATTAAATTTCTGAAGGATATGCTACAGATATCTAAAGACAATGATCCTACCATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTATTTAAAGATATTGTCCCTGGCTATCGAATAAGGCTTCCTACTGAGAAAGAACTGGAAATGAAGGTTTCAAAGACTGTGAGAAAGATGCGTTACTATGAATCAACTCTACTTTCGGCATACAAGGCATACCTGCAAAGGCTGATGTACTTAGAAAAGAAGCCCTTATTTCAACTTGTAGCAGTACGTTGTATTTGTACATTGCTCGACATACATCCTCATTTCAACTTCAGGGAAAACCTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCCATAAGGAAACTTTGTTGTTCTACAGTTAAATCATTGTTTACAAATGAGGGTAAACATGGTGGTGAGGCTACTGTAGAGGCTGTTCGATTGATTGCCGATCTTGTCAAGGCTAATAATTGTCAGTTGCATCCTGATTCCGTTGAGGTGTTTTTGTCTCTTTCATTTGATGAGGATCTTGGGAAGTCTGAGAAGAAAGAAGAGGATCATAAATTTAAAAACAAGAAAAATAAGAAGAGAAAAAACATGGAGGCATCAAATCAGTTGCCAGATAATGATAGAAAGAGAAGTAAGCATGAAATGATCTCTAAGACAAAAGAGGAGGTTGAAGCTGAGTACAAGGCTGCATCGTTTGCTCCAGATGTTATGGAGAGGAGACAAATGCAATCTGAAACACTCTCTGCCGTGTTTGAGACGTATTTTCGCATTTTGAAGCACACAATGCATTTCATAGCAACCAGGCCTGAAGTAAATACTGGGGCATCATCTGCAGTGGAATCCCACCCATTGTTTGCTCCTTGTCTCAAAGGACTGGGAAAGTTTTCACATTTGATTGACCTCGACTTCATGGGGGACCTAATGAACCATCTCAAAGTACTTGCTTCTGATGGTAGTAACTCTGGCAACAGTTCTGAGAAGTGTCCTAAATTTTTGACTGTGACTGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAATAATCTTGATGCTCTGATTGTTGATTTGCAAGACTTCTTCGTCCATCTTTACAGTCTTATACTTGAATACAGGCCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTCATAAAGCGTTTGGCTACATTGTCGCTGTGCTTTGGATCTGCGGAGTCCATGGCTGCATTGGTCACAGTAAGGCATCTCCTTCAAAAGAATGTGAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCAGTTTCCGGAACAATCCCAAAATATCAACCATATTCCACGGATCCCAATTTAAGTGGAGCTCTTGCTTCTGTGCTTTGGGAACTCAATCTTTTGTCCAAGCATTATCATCCTTCTATATCAACAATGGCCTCTGGTATATCAAGCATGAGTGTTGCACAGAATCAAGTCATTCTCTCAAAAACCTCTCCTACACAAGCTTTAATGGAAATGTCTCTTGATCAGGAATTAACTTTCCCGCAACATAGTGGCACTATAAAATTGAATAACAAGAAGAGAAGAACAAATGGTCCTGCAACATCACCCTCCATTGGTTCTGCATCAGTCACTTCAAGTTCATTCAATGAGGATGAGTTGCATGAGAAACTTGGTTCCCATTTTACGCTTCTTCGCGACATTAGGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAAGACTACACTATCACTACAGCTATATGAACAATATAAGAAACAAAAGCAAAGATCAAAACCAAAGAAGAAAGCCATTGCTTAA 3873 0.4247 MDNGDIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAMDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPNPDDAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQCLDATGVDGAIIVTTPQQVSLIDVRKEVSFCKKVGVKVLGVVENMSGLCQPLMDFKFMKLTDNGEQKDVTEWILGYMREKAPEMLNLMACSEVFDSSGGGAMKMCNQMGVPFLGRVPLDPQLCKAAEEGRSCFADKDCVVSAPALKKIIEKLIEANGLSMAAREKNKNPSTSETLSVVLPRGRSNAYDDGSDIGDAKPSRNIPVGLISAAEGVGKQGMHTSFFSKFGRRDRTVFKRENPFTILPSSEVLSVYHPQRGQRNATGMGKKKQKEKIVLPPELPPEIPDDEVEVSDEDLQFVNENRGYASLFSTLDTQSITKHVTRVADAKDDALEKLYEKKLRKNALKKEKEETGIQVDRVDVLPIKSLDGQLHYRTATKAESQNGPSEEETGEDVNDRKSLVKLTKAEKRAKLKKRPMELTKSNKWPTTSYFINILIFFHLAEVKEDLTTEEAFESKKCKLAELGNALLTDPESNIKFLKDMLQISKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLMYLEKKPLFQLVAVRCICTLLDIHPHFNFRENLLDATVRNISSTNEAIRKLCCSTVKSLFTNEGKHGGEATVEAVRLIADLVKANNCQLHPDSVEVFLSLSFDEDLGKSEKKEEDHKFKNKKNKKRKNMEASNQLPDNDRKRSKHEMISKTKEEVEAEYKAASFAPDVMERRQMQSETLSAVFETYFRILKHTMHFIATRPEVNTGASSAVESHPLFAPCLKGLGKFSHLIDLDFMGDLMNHLKVLASDGSNSGNSSEKCPKFLTVTERLQCCIVAFKVMRNNLDALIVDLQDFFVHLYSLILEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCFGSAESMAALVTVRHLLQKNVKCRNLLENDTGGGSVSGTIPKYQPYSTDPNLSGALASVLWELNLLSKHYHPSISTMASGISSMSVAQNQVILSKTSPTQALMEMSLDQELTFPQHSGTIKLNNKKRRTNGPATSPSIGSASVTSSSFNEDELHEKLGSHFTLLRDIRENERLRKELDKTTLSLQLYEQYKKQKQRSKPKKKAIA 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03031 1290 Pfam CBF/Mak21 family 1008 1163 IPR005612 -
Aip08g03031 1290 MobiDBLite consensus disorder prediction 849 890 - -
Aip08g03031 1290 ProSitePatterns Mrp family signature. 166 182 IPR000808 GO:0005524
Aip08g03031 1290 Hamap Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1]. 7 346 IPR028601 GO:0016226|GO:0051536|GO:0051539
Aip08g03031 1290 Hamap Iron-sulfur cluster carrier protein. 53 342 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Aip08g03031 1290 CDD Mrp_NBP35 60 313 - -
Aip08g03031 1290 MobiDBLite consensus disorder prediction 1199 1231 - -
Aip08g03031 1290 Pfam Nucleolar complex-associated protein 644 734 IPR011501 -
Aip08g03031 1290 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 455 1233 IPR016903 -
Aip08g03031 1290 Pfam NUBPL iron-transfer P-loop NTPase 58 244 IPR033756 -
Aip08g03031 1290 MobiDBLite consensus disorder prediction 865 890 - -
Aip08g03031 1290 SUPERFAMILY ARM repeat 663 1045 IPR016024 -
Aip08g03031 1290 MobiDBLite consensus disorder prediction 1 27 - -
Aip08g03031 1290 MobiDBLite consensus disorder prediction 563 587 - -
Aip08g03031 1290 Gene3D - 54 356 IPR027417 -
Aip08g03031 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03031 Aip-Chr8 119480147 119493874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03031 453 1262 Core DNA Replication Machinery Family AT1G79150 56.622 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03031 K14834 - gmx:100776136 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03031 08 119480147 119493874 Aip08g03031 08 119480147 119493874 ECH