Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03025 ATGTCGATGACGCTGAGTTATTTACCGTTCGATATAATGTCGATGGAGGCGAATGGGTTTGTGGAGCGAAGCTACGAGTTTTCATCTAATTTTGATCGAGTCCATGCGCTGCAGGTTGTGGAGGATGGGATGAGCGGCGAAACCGTGCCGGTGGAGGAAGCAGAAGCGATGGATTTGTCAGCCGTAGATGCAGACATAGATGTAGAAGAATCAGTGAGGATCGTTGACGGGATTGGGTCGTTTGGCGGAATTGAATTTTCAACTCTGACAGCGAAGGACATCCTTACGACGGAGTTCATAAACTTGCAGGCAGCTTATGACTACTACAACGAATACGGTCGCATTAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAAGGGGCGGAGGGTGAAATCATTTGGCAGATTTTTGTGTGCTCGTGGGAAGGAGAGCGAAATGGGAAACACATGCAACAGGGAGACAGGAAGATGGATCCTCGACCTATCACACGGTGCGGGTGTGAAACTCGGATAAAGTCAACGGGATTCGAGACTGTTGGGTTCGAGATAAAGGATATCTATAATGCAATAGAGAAGCAAAGGCGGGTCGGTGCGACAAATGCTGAAGCCGTGTTGAAGTTCTTGGCAACTTTAAGGACTACTGATTGTGGAATGTTATGGAAGTACTCGCTGGATGGTGACAAGAGGCTGGAAAATCTCTTCTGGTACGATGGTACAAGCCGTTATGACTACAGTGTGTTCGGGGATATCCTGGGATTTGATGCAACGTATGTCATAACAAATACAAGTGCCTGTTGGTAA 816 0.4792 MSMTLSYLPFDIMSMEANGFVERSYEFSSNFDRVHALQVVEDGMSGETVPVEEAEAMDLSAVDADIDVEESVRIVDGIGSFGGIEFSTLTAKDILTTEFINLQAAYDYYNEYGRIKGFSVRRSKVGRRTKQGAEGEIIWQIFVCSWEGERNGKHMQQGDRKMDPRPITRCGCETRIKSTGFETVGFEIKDIYNAIEKQRRVGATNAEAVLKFLATLRTTDCGMLWKYSLDGDKRLENLFWYDGTSRYDYSVFGDILGFDATYVITNTSACW 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03025 271 PANTHER OS02G0262500 PROTEIN 193 263 - -
Aip08g03025 271 PANTHER OS02G0262500 PROTEIN 92 176 - -
Aip08g03025 271 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 193 263 IPR031052 GO:0006355
Aip08g03025 271 Pfam FAR1 DNA-binding domain 107 179 IPR004330 -
Aip08g03025 271 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 92 176 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03025 Aip-Chr8 119411934 119413350 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g03025 FAR1 2.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03025 - - ahf:112777976 405.986