Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03018 ATGACGGATCAGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGCCACCATTTACCAAAGTTCATTGTTCAAGATGATGATTTCCCAAGTGATATTGAGAGGATAATTGCTTCAGCATTTCTGCAAACTGACAATGCCTTCGCAGAAGCCTGCTCTGTGGATGCTACCCTTGCATCTGGCACTACGGCGTTGGCTGCTCTTGTTATTGGAAGGCAACTGGTGGTAGCAAATGCTGGAGATTGCCGAGCTGTGCTGTGTCGGCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTTAATGGACAACTCAATGTTGCTCGTGCTATTGGCGATTGGCACGTGGAAGGGATGAAAAGCCGAGGCGGGGGACCACTCAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACCGCCGAGGATGAATTCCTCATAATTGGTTGCGACGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTAGACTTTGCTCGCCGCAGGCTTCAGGAACATAATGACCCCACCATGTGTAGCAAGGATTTGGTTGATGAGGCTTTGAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAATTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTGGTGCCGCGCTCGAGAGTGCACAGGAGCTTCTCCCGCAAAGGCTTGAGGGAGTTGCAAAGCTTCCTGGATAACTTAGGTAATTGA 789 0.4753 MTDQVFDGHGGKHAADFACHHLPKFIVQDDDFPSDIERIIASAFLQTDNAFAEACSVDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHVEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVVPRSRVHRSFSRKGLRELQSFLDNLGN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03018 262 CDD PP2Cc 5 226 IPR001932 -
Aip08g03018 262 Gene3D - 4 230 IPR036457 -
Aip08g03018 262 ProSiteProfiles PPM-type phosphatase domain profile. 1 226 IPR001932 -
Aip08g03018 262 SUPERFAMILY PP2C-like 5 228 IPR036457 -
Aip08g03018 262 Pfam Protein phosphatase 2C 4 218 IPR001932 -
Aip08g03018 262 PANTHER PROTEIN PHOSPHATASE 2C 5 248 IPR015655 GO:0004722|GO:0006470
Aip08g03018 262 SMART PP2C_4 2 224 IPR001932 -
Aip08g03018 262 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 5 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03018 Aip-Chr8 119289578 119291026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03018 5 262 PP2C-type Phosphatase Gene Family AT2G25620 75.191 1.83e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03018 K14803 - gmx:100815725 472.241