Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03017 ATGGAGGAAATTGAAGGGTTCAATTGTGGTGAAAGTAAGAGCCCCATTGATGGTCGACCTCCGAATCCACCTTCTTCTGCTGCCTCTGCCTTTCGCCAATGCCATCACAACAAGAAACCCCTTGTTCGCCATCCTTCTCTTATGATGACAAAACTTTCTGATGTATCCGTTGAACCGGAGCGTGCCACTGAAGATTGTCAATCTGATTTCCTTCCAAAGCTTCGTTCTGGAGGATGTGGTAATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAATTTTATGCAAGAGAATGCACTCAAGAACCATATAGACGGACCTAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGCCACCATTTACCAAAGTTCATTGTTCAAGATGATGATTTCCCAAGTGATATTGAGAGGATAATTGCTTCAGCATTTCTGCAAACTGACAATGCCTTCGCAGAAGCCTGCTCTGTGGATGCTACCCTTGCATCTGGCACTACGGCGTTGGCTGCTCTTGTTATTGGAAGGCAACTGGTGGTAGCAAATGCTGGAGATTGCCGAGCTGTGCTGTGTCGGCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTTAATGGACAACTCAATGTTGCTCGTGCTATTGGCGATTGGCACGTGGAAGGGATGAAAAGCCGAGGCGGGGGACCACTCAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACCGCCGAGGATGAATTCCTCATAATTGGTTGCGACGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTAGACTTTGCTCGCCGCAGGCTTCAGGAACATAATGACCCCACCATGTGTAGCAAGGATTTGGTTGATGAGGCTTTGAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAATTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTGGTGCCGCGCTCGAGAGTGCACAGGAGCTTCTCCGCCGAAGGCTTGAGGGAGTTGCAAAGCTTCCTGGATAACTTAGGTAATTGA 1125 0.4684 MEEIEGFNCGESKSPIDGRPPNPPSSAASAFRQCHHNKKPLVRHPSLMMTKLSDVSVEPERATEDCQSDFLPKLRSGGCGNMGFRSSMEDVYVCVDNFMQENALKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVQDDDFPSDIERIIASAFLQTDNAFAEACSVDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHVEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVVPRSRVHRSFSAEGLRELQSFLDNLGN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03017 374 MobiDBLite consensus disorder prediction 1 30 - -
Aip08g03017 374 ProSiteProfiles PPM-type phosphatase domain profile. 75 338 IPR001932 -
Aip08g03017 374 SMART PP2C_4 65 336 IPR001932 -
Aip08g03017 374 Gene3D - 52 342 IPR036457 -
Aip08g03017 374 Pfam Protein phosphatase 2C 76 330 IPR001932 -
Aip08g03017 374 SUPERFAMILY PP2C-like 69 340 IPR036457 -
Aip08g03017 374 CDD PP2Cc 75 338 IPR001932 -
Aip08g03017 374 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 45 360 - -
Aip08g03017 374 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Aip08g03017 374 PANTHER PROTEIN PHOSPHATASE 2C 45 360 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03017 Aip-Chr8 119286382 119289548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03017 1 374 PP2C-type Phosphatase Gene Family AT2G25620 66.327 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03017 K14803 - gmx:100815725 615.535