Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02995 ATGGTTAAAAGGAATCCAGAAGCTAATCACTTCATGAAGGTTCAGCAAAACTGCATTAATTGTGGAGTTTGTATGGGCAAGTACTTTTGCGGGACATGCAAGCTTTTTGATGACGATGTATCTAAGAAACAATACCATTGCGGCGGCTGTGGAATTTGCAGTCACGCTTGTGTGGAGAAGGCAATGCATCATGATTGTCCTGTTTGTTTTGAGGAAAAAATCTTGAAACAGCCACAATGGTACAACCTCCACGAAATATCTACTTTGATAAATTCCGAAGTCATGCTTTTAGACTTTTGA 300 0.3967 MVKRNPEANHFMKVQQNCINCGVCMGKYFCGTCKLFDDDVSKKQYHCGGCGICSHACVEKAMHHDCPVCFEEKILKQPQWYNLHEISTLINSEVMLLDF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02995 99 PANTHER CHY-TYPE/CTCHY-TYPE/RING-TYPE ZINC FINGER PROTEIN 54 71 - -
Aip08g02995 99 PANTHER CHY-TYPE/CTCHY-TYPE/RING-TYPE ZINC FINGER PROTEIN 13 53 - -
Aip08g02995 99 ProSiteProfiles Zinc finger CTCHY-type profile. 25 91 IPR017921 -
Aip08g02995 99 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 54 71 - -
Aip08g02995 99 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 13 53 - -
Aip08g02995 99 SUPERFAMILY Zinc hairpin stack 26 76 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02995 Aip-Chr8 118804499 118807117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02995 22 69 C2H2 Transcription Factor Family AT3G18290 30.137 8.47e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02995 K10144 - gmx:100803569 119.398