Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02987 ATGGGTGTAGATTACTATAGTATATTGAAGGTAGAAAGAAATGCAACGGAAGATGATTTAAAGAAAGCATACAGGAAATTGGCAATGAAATGGCATCCTGACAAGAACCCTAACAATAAGAAAGAAGCTGAAGCCAATTTCAAGCAAATCTCTGAGGCCTATGAGGTATTGAGTGATCCTCAAAAGAGGGTGATTTATGATCAGCAAGGAGAGGAAGGTTTGAAACATATGCCACCACCTGGGAATGAACCAACAAATGGATTCAACCCAAGAAATGCAGAGGATATCTTTGCAGAGTTCTTTGGAGACAACCCTTTTGGATTTGGATCATCTGGACCTCATGGAAGGTCCAGGTTCCAAACCGACGGAGGCGGATCATTCAGCGGATTCCATGCGCCGCTGAAGAAGCCGCCTCCTGTTGAGAGCAAGTTGGCATGTAGTTTGGAAGAGTTGTACACTGGTTCCACAAGAAAAATGAAGATCTCAAGGATTGTTATGGATGCTAATGGGAGGCCAAACCCAGAAACTGAGATATTAACAATTGACATAAAGCCAGGTTGGAAAAAAGGAACAAAGATCACATTCCCAGACAAAGGTAACCAGCATCCAAACCAGCTTCCAGCAGACCTTGTTTTTATGATTGATGAGAAGCCACATAATTTATTCAAGAGAGATGGCAATGACCTTATTATCACAAAAAATGTGTCGCTGGCCGAGGCCATCGGCGGCACTTCAGTGAACATTACAACACTCGACCGGCGCGAATTGTGCATACCGGTGACTCATATCATTAGCCCGGGTTACGAGTTGACTGTCCCAAAAGAAGGGATGCCTATAACAAAGGAGCCAGGACATAGGGGTGACTTGAGGATCAAGTTTGAGGTTAAGTTCCCCACAAAGTTGTCACAAGAGCAAAGGGCAGGGCTCAGGAGAGCATTGGGTGGTTGA 948 0.4441 MGVDYYSILKVERNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEANFKQISEAYEVLSDPQKRVIYDQQGEEGLKHMPPPGNEPTNGFNPRNAEDIFAEFFGDNPFGFGSSGPHGRSRFQTDGGGSFSGFHAPLKKPPPVESKLACSLEELYTGSTRKMKISRIVMDANGRPNPETEILTIDIKPGWKKGTKITFPDKGNQHPNQLPADLVFMIDEKPHNLFKRDGNDLIITKNVSLAEAIGGTSVNITTLDRRELCIPVTHIISPGYELTVPKEGMPITKEPGHRGDLRIKFEVKFPTKLSQEQRAGLRRALGG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02987 315 CDD DnaJ_C 138 301 - -
Aip08g02987 315 SUPERFAMILY HSP40/DnaJ peptide-binding domain 139 219 IPR008971 GO:0006457|GO:0051082
Aip08g02987 315 SUPERFAMILY Chaperone J-domain 3 112 IPR036869 -
Aip08g02987 315 CDD DnaJ 4 59 IPR001623 -
Aip08g02987 315 SMART dnaj_3 3 62 IPR001623 -
Aip08g02987 315 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aip08g02987 315 Gene3D - 139 217 - -
Aip08g02987 315 Pfam DnaJ domain 4 67 IPR001623 -
Aip08g02987 315 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aip08g02987 315 Pfam DnaJ C terminal domain 140 298 IPR002939 -
Aip08g02987 315 SUPERFAMILY HSP40/DnaJ peptide-binding domain 222 307 IPR008971 GO:0006457|GO:0051082
Aip08g02987 315 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aip08g02987 315 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aip08g02987 315 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aip08g02987 315 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aip08g02987 315 Gene3D - 218 314 - -
Aip08g02987 315 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 315 - -
Aip08g02987 315 Gene3D DnaJ domain 3 112 IPR036869 -
Aip08g02987 315 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02987 Aip-Chr8 118686567 118688923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02987 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 1.81e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02987 K09510 - qsu:111983019 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02987 08 118686567 118688923 Aip08g02987 08 118686567 118688923 ECH