Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02983 ATGCACACGCACTCGTCGATTCGGGATCGCACGCACGAATTCCATACCATCGCCGAGAGGTTGAAGAAATCTTCTTCCTCAAACGGACCCACAACCACTTCCTCCTCATCTGCTGCTTCTTCTTCTTCCAGATCGGATGAACAGCGATCCGCAATCGCAATTCAGTCCGAGTTCAATCGAAGGGCTTCCAAGATTGGCTATGGGATCCACCAAACCTCTCAGAAGCTCGCCAAGCTCGCCAAGTTGGCGAAGAGGACTTCGGTTTTTGATGACCCTACAATGGAAATCCAAGAGCTTACGAGTGTAATCAAGCAAGACATTACTGCGTTGAACTCTGCAGTTGTGGATCTTCAGTTGCTATGCAACTCGAGGAATGAGAGCGGGAACGTTTCTGCCGACACTACCAGCCATTCGACTACTGTTGTAGATGACCTCAAGACCCGTTTGATGAGCACCACCAAGGAGTTCAAAGAAGTTCTCACCATGAGAACCGAGAACTTGAAAGTACATGAGAATAGGAGACAATTGTTTTCGGCCTCTGGTTCTAAGGATGCTGCTAATCCTTTTGTCCGTCAACGGCCATTAGCTACAAGGACGGCTGCTAGTGCTTCTAATGCCCCCGCAGCTCCATGGGCTAGTGGGTCTTCATCTTCATCTGAGTTGTTTCCTAAGAAGCAGGCAGATGGGGAGAGTCAGCCATTGCTACAGCAACAGCAACAACAACAGCAGCAAATGGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCATAATGTTGAATCCACTATTCATGAACTCAGCAATATCTTTAATCAATTAGCAACTCTCGTTTCCCAACAAGGAGAGCTTGCTATCAGGTTCTATATGTCTCACTGGTGTACTATGTGCTTACATTCTTATGAGCCTTTATTGCTAAAATTGATTGTGGATTGA 945 0.4667 MHTHSSIRDRTHEFHTIAERLKKSSSSNGPTTTSSSSAASSSSRSDEQRSAIAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLCNSRNESGNVSADTTSHSTTVVDDLKTRLMSTTKEFKEVLTMRTENLKVHENRRQLFSASGSKDAANPFVRQRPLATRTAASASNAPAAPWASGSSSSSELFPKKQADGESQPLLQQQQQQQQQMVPLQDSYMQSRAEALHNVESTIHELSNIFNQLATLVSQQGELAIRFYMSHWCTMCLHSYEPLLLKLIVD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02983 314 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 4 23 IPR021538 -
Aip08g02983 314 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 250 287 IPR000727 -
Aip08g02983 314 PANTHER SYNTAXIN-32-LIKE 6 291 - -
Aip08g02983 314 SUPERFAMILY t-snare proteins 56 287 IPR010989 GO:0016020|GO:0016192
Aip08g02983 314 MobiDBLite consensus disorder prediction 20 49 - -
Aip08g02983 314 Gene3D - 53 290 - -
Aip08g02983 314 MobiDBLite consensus disorder prediction 197 248 - -
Aip08g02983 314 MobiDBLite consensus disorder prediction 21 49 - -
Aip08g02983 314 PANTHER SYNTAXIN 6 291 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02983 Aip-Chr8 118545203 118549775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02983 2 290 SNARE and Associated Proteins AT3G24350 61.613 1.79e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02983 K08490 - gmx:100777961 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02983 08 118545203 118549775 Aip08g02983 08 118545203 118549775 ECH