Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02981 ATGGGAAATTCGAAAAAAGATGAAGCGAAGATTGAAAAAATAATTCGTGGTCTTTTGAAACTTCCTGAAAATCGAAGATGCATCAATTGCAACCTCTTGGGACCACAATATGTGTGTACAACTTTCTGCACATTTGTCTGCACAAATTGCAGTGGAATACATCGAGAATTTACACATCGAGTAAAATCAGTATCCATGGCTAAATTTACTTTAGAAGAAGTTGAAGCTATTCAAGCAGGTGGTAACGAGAGAGCCAAGGAAATTTATTTTAAATGCTGGGACCCTCAACGACATTCTTACCCTGAATCCAACAACATGCAGAGACTCCGCGAGTTCATCAAGAATGTGTATGTGGAAAGAAAATTTACCGGTGAACATCATGTGGATCTTCCGAGGATTAGAGAAGAAGGAAAGGAGGAACCATACCAAAGTAAGAAGATTAATTTATTTCGTATTGAGCCAAAAAGTCCATCTTATGAAGCTAGAGTTCAGAGAAGTTCTAGTGCAAGATCTCCTGATATAAGAAGTGATGACAATAACAATGTTAGATTTTACGTTGATGAAAGAAGAAGCCCAAGATATGCCCAAAATTTGGCAAGGCATGGCAGCTTTGCTAGAAAGCCTATACAAATTGAGGTTGTTGACAACAGGTTCCGAGACGGTGAATCAAGAAACAGCAAGGTTACAGATTTAGACACAAAGCTAAAACAGCTTCAACCAGCCAGGCAGAAGACTGTAGACGAATCTCAATTACCTGTCGTACGCCCTTTGGGAGAAGTATCAGGAGAGAATGGTCCATCTCTTAAAGCCTCTAACGCTGCTTCTGTACCAGAAATGCAGTCTATATCACAACCAATTGAAGAAAACTGGGCTATATTTGAAGATTTTCCAGTCGCTAATGCTGCCGAAAACAAAATCTCAAACACAAATATATTCACATCTTCTGTAACAATGACAACACCTCAAGCAACACATACAAATTCCTTAGATTTCTTACTTTCTGAATTGTCAGGTCCATTGGTTGCAACAACTGGGGACATGTCTACGGTCTCAACTTTTAACAATGATCTAACAATTGTGCCTGTAGAAAATTCGAGCACACATGGGGATTTGCAGCACTTGCCACCTTTTCCAATATCCGAGGCAACTGCTTCACCAACCAGTAGTGATGCTTGGTCTATTATACCGATCCAAGCCAATGAGATGGAACAACCTTCTAATGCTTTGCCTTCAAATGATGAGATAAATCATAGAGAAGAGTCCAACAAAGTCTTAGATTGGCAGACATCACCAAGCATGCAATTCTCTCCTGCAGTATCAGTAGGTAGTAGCTCTACAGCACAACCAACAAGTACACCAATCACACCTATAGCTCCAAATGATATGCAATCAGATGTTCTAAATTCACATGATCCCTCCAGTGCTTTCACTGAACTCTCTCCTCAGACCAACTCAAAACCAACTCAAGAAACCAAATCTGGTGTTGGCTTAAAACCTTCAACAGTAGAAAACAGGTCTACTGGAAGAATGGAACTTCCAGAGGACCTTTTCTCTTCAAGCTACTTATCTGGCCCTCCTACACCACTTTCAGGTTGGCAAAATGATCAACCTCAACACCATGGAATGGGATATGGCTTACAGTATTATCCTAATGCACCGTCCCCCTCAGCATTCCCTATTGCAGCAAGATCCTCATCAAATCCATTTGCAGCAACTGAGGACAAACCTTTAGCCCACACCTTATCACTTCCCAATATGTCATGTACCCTACCTGTATCTCCCGGAGCAGGACTAATGCATGCTTCAAGTTATGGGTCTTCGGGAATGGTTCCTCAGTCCACAAGTTTTGGATCTCCACTTGTTCATCCACAATCTGCATCTGGATTTCCCAATAGTGCATACTTTGGCCAAGTTAATAACATGCAACCTCCTAGATTTGAAAGAGCTGCTAGTACAAGTGATGATGAAAGTGTTTTTGGATCCCTAAGCACCATGAAGCTTTCAAGTGGTGAGTATATGACACAAACCACTCCAAATCCTTTTTCGAAGAAGGGAAGAAATCCATTTGGAGATATATAA 2079 0.4084 MGNSKKDEAKIEKIIRGLLKLPENRRCINCNLLGPQYVCTTFCTFVCTNCSGIHREFTHRVKSVSMAKFTLEEVEAIQAGGNERAKEIYFKCWDPQRHSYPESNNMQRLREFIKNVYVERKFTGEHHVDLPRIREEGKEEPYQSKKINLFRIEPKSPSYEARVQRSSSARSPDIRSDDNNNVRFYVDERRSPRYAQNLARHGSFARKPIQIEVVDNRFRDGESRNSKVTDLDTKLKQLQPARQKTVDESQLPVVRPLGEVSGENGPSLKASNAASVPEMQSISQPIEENWAIFEDFPVANAAENKISNTNIFTSSVTMTTPQATHTNSLDFLLSELSGPLVATTGDMSTVSTFNNDLTIVPVENSSTHGDLQHLPPFPISEATASPTSSDAWSIIPIQANEMEQPSNALPSNDEINHREESNKVLDWQTSPSMQFSPAVSVGSSSTAQPTSTPITPIAPNDMQSDVLNSHDPSSAFTELSPQTNSKPTQETKSGVGLKPSTVENRSTGRMELPEDLFSSSYLSGPPTPLSGWQNDQPQHHGMGYGLQYYPNAPSPSAFPIAARSSSNPFAATEDKPLAHTLSLPNMSCTLPVSPGAGLMHASSYGSSGMVPQSTSFGSPLVHPQSASGFPNSAYFGQVNNMQPPRFERAASTSDDESVFGSLSTMKLSSGEYMTQTTPNPFSKKGRNPFGDI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02981 692 MobiDBLite consensus disorder prediction 520 537 - -
Aip08g02981 692 PANTHER ARFGAP/RECO-RELATED 1 690 IPR044820 GO:0005096
Aip08g02981 692 MobiDBLite consensus disorder prediction 256 276 - -
Aip08g02981 692 CDD ArfGap_AGFG 12 122 - -
Aip08g02981 692 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Aip08g02981 692 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Aip08g02981 692 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Aip08g02981 692 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Aip08g02981 692 MobiDBLite consensus disorder prediction 669 683 - -
Aip08g02981 692 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Aip08g02981 692 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Aip08g02981 692 PANTHER ARFGAP/RECO-LIKE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 690 - -
Aip08g02981 692 MobiDBLite consensus disorder prediction 158 181 - -
Aip08g02981 692 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 140 IPR001164 GO:0005096
Aip08g02981 692 MobiDBLite consensus disorder prediction 433 538 - -
Aip08g02981 692 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Aip08g02981 692 MobiDBLite consensus disorder prediction 160 175 - -
Aip08g02981 692 MobiDBLite consensus disorder prediction 433 507 - -
Aip08g02981 692 MobiDBLite consensus disorder prediction 669 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02981 Aip-Chr8 118467521 118472887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02981 15 122 C2H2 Transcription Factor Family AT4G05330 36.842 5.20e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02981 - - ahf:112707813 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02981 08 118467521 118472887 Aip08g02981 08 118467521 118472887 ECH
Aip05g03182 05 136039768 136046957 Aip08g02981 08 118467521 118472887 ECH