Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02967 ATGTGTAGCACCTTTGCCGCCGCCGCAGACTCCTCCATCTCCGGCGACGGTGACTCCCCCGCTGCCGGCGAGATTATGCTGTTCGGCATTAGGGTGGTGGTGGACTCCATGAGGAAAAGCGTCAGTATGAACAATCTGTCGCAGTACGTGCATCCTCAAGATGACTCCAACAACAACAAAGACGCTGCCTTCTCCACCACCGGTTACGCGTCTACCGATGACGCTGCTCCTCACAACTTCGGCAAGAACCGCGAGCGCGAGCGCAAGCGAGGTGTTCAGTGGACGGAGGAAGAGCACAAGCTATTCCTGGTGGGATTGCAGAAGGTAAGGAAAGGTGATTGGAGAGGGATCTCTAGGAACTACGTCAAGACTCGGACGCCCACGCAGGTCGCCAGCCATGCTCAGAAGTACTTCCTCCGCCGGAGCAATCTCAACCGCTGTCGCCGTAGATCCAGCCTCTTTGACATCACCACCGATTCGGTCTCTTCGATTCCAATGGAGGAAGAACAGATCCAGAACGGAGACAGTGTGCCTCATTCACAGCCTCTGTGCCCTGCAGCTCCTGAAAATAGCAATACCAATGGATTTCCGATGGTGCCGGTGTATCCGTTGGGGGTTGGTCCAGGTGTGATCAGTCAAAGCTGGGAATCCAATGGATGA 660 0.5545 MCSTFAAAADSSISGDGDSPAAGEIMLFGIRVVVDSMRKSVSMNNLSQYVHPQDDSNNNKDAAFSTTGYASTDDAAPHNFGKNRERERKRGVQWTEEEHKLFLVGLQKVRKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRCRRRSSLFDITTDSVSSIPMEEEQIQNGDSVPHSQPLCPAAPENSNTNGFPMVPVYPLGVGPGVISQSWESNG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02967 219 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 212 - -
Aip08g02967 219 CDD SANT 94 138 IPR001005 -
Aip08g02967 219 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Aip08g02967 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Aip08g02967 219 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Aip08g02967 219 SMART sant 90 140 IPR001005 -
Aip08g02967 219 MobiDBLite consensus disorder prediction 48 92 - -
Aip08g02967 219 Gene3D - 92 144 - -
Aip08g02967 219 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Aip08g02967 219 MobiDBLite consensus disorder prediction 48 73 - -
Aip08g02967 219 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Aip08g02967 219 PANTHER KIN2 17 212 - -
Aip08g02967 219 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02967 Aip-Chr8 118255437 118256096 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip08g02967 Myb_DNA-binding 9.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02967 - - aip:107632799 395.586