Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02932 ATGAGAAATAGCATTCCCATTGCGGTTCCGTTGAGATTGAGACCAAACATTAGCAACACTCTACCACATCACAAGTTCCGGCCAACCTGCTTTCACAGCCATGAAGGACATACCATTAGTTGCGTGCCCTACCCCGCTCCTCAAACAAAGCCCATGGCGCTTCATTTCGAGGTTCAACTCCCCATTCTATTTGAGTTCTCTTACGCCTTCACATTGCTGAAGTTTTGTTGTCTTATTTATGTGAAAATCAACGACATTCATTTGTTGCTATTGTTGTTGTTTTACCTTTGGATGACTGAGGCCGAAAGAATGATATGGGTCTTATTGTTGCATCTTGCTGATATCACAGAAGAAGGTGTGACATTTCAGTCACCGGTGGATGGCAAGCCAATGCTTCTTACACCCGAAGAATCAATTCAGATACAAAATAGAATTGGAGCAGATATTATTATGGCTTTGGATGATGTCGTAAAGACCACCATTACTGGTCCAAGAATTGAGGAAGCTATGTATCGAACGCTTAGATGGATAGACAGATGCATAGCAGCGCACAAGAGACCTCACGATAAGAACTTGTTTGGTATTGTACAAGGTGGTTTAGATCCTGAGTTGAGGGACATCTGTGTCAAAGGTTTGGTAGACCGCAACTTGCCTGGTGCTTTGGGTGCAGAGATATATGATTGTGTCTACCCTACCCGTACAGCACGTTTTGGGACTGCCCTTATTCCTGAGGGAGTACTAAAACTAAAACACAGAGCCATGGCTGATGATACTCAACCAATTGATCCTACCTGCCCTTGTATGGTTTGCAAGAACTACACCAGGGCCTACATCCATTGCCTTGTCACTAAAGACGCCATGGGGTCTCAGCTTCTATCATATCATAATTTATATTACATGATGCGGCTTAGCAGGAATTTACACACATCAATAGTTGAGGGAAGGTTCCCAAAGATCCACAACACCGGGGTATGGTCGGAGACAAAGAGCTTCGACGATTTCGGCATGCCACCGGTTCCCACAAGGTGGTGTGGACAATGCGAGTCCACTCTAGATTTCGATCCTTTCCTCTGTAATAAAAAGCTCATCGGAGCCAGAATTTTCTCCAAGGGATACTTATTGTCCTCCGACAGTAGTTACATGGTTAGGGAGAAGGACCAAGTGTCAACACACGACCGTGACGGACATGGAGGGTTTGAGGAGGGATGCTCAATCCCTTCTACTTCACTTGATGACCCAGTTTATCCCGCCTGGGAAAGGTGCAATAATTTAGTCCTTTTCTGGCTATTTCATTCCCTTTCACCTTCCATTACCCAAAGTATTATTTATCTGTCTACTGCTTCTTCTGTTTGGGAAGATCTTCGAGATCGCTTCTCACAGTCAGATCTATTGCACATTGCTGAATTGCAGGAGGAAATTTATGCACTCAAACAAGGTTCACTCTCTGTCACTGACTTTTTCACTGCCCTAAAGACTCTATGGGAAGAGATAGAAAATTCACACCCTCTCCCTCTCTGTACATGCCCTGCAAAGACTTACCGTAATCAAGACTTCATCATCCGATTCTTGAAGGGACTTGATGAATGTTTTTCAGTGGTAAGATCCCAATTGTTTCTCCTTGATCCTCTACCTCCAGTCAATCGAGTTTTTGCCATGGTCAATGAACAGGACACGGTCGCGGACGCGGCTCTGGTTTCTCCAGCAAAGGACGCGGCGAGAATTCCTCCAGGCAGTGTACTCATTCTGACAGAACAGGGCACACGGTGGACGTGTGCTATGGAAAGCACGGGTATCCAATTGGACACCCGCGATACCCTGGACGACCGCGTGCTGGTGATCATGCTGCTCCCTCCATCAACAGCGCCGCTTCCTCCATTGCTAACCCTACTCTGTTCTCCAGCGGCACCGCACCGTCATCCTCTTCATACAGCCTGGTTCAAGAAAAACAAGCTATTAGGGCACCAACTGAACCAGTTCTTGGACTGA 1986 0.4607 MRNSIPIAVPLRLRPNISNTLPHHKFRPTCFHSHEGHTISCVPYPAPQTKPMALHFEVQLPILFEFSYAFTLLKFCCLIYVKINDIHLLLLLLFYLWMTEAERMIWVLLLHLADITEEGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHDKNLFGIVQGGLDPELRDICVKGLVDRNLPGALGAEIYDCVYPTRTARFGTALIPEGVLKLKHRAMADDTQPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMRLSRNLHTSIVEGRFPKIHNTGVWSETKSFDDFGMPPVPTRWCGQCESTLDFDPFLCNKKLIGARIFSKGYLLSSDSSYMVREKDQVSTHDRDGHGGFEEGCSIPSTSLDDPVYPAWERCNNLVLFWLFHSLSPSITQSIIYLSTASSVWEDLRDRFSQSDLLHIAELQEEIYALKQGSLSVTDFFTALKTLWEEIENSHPLPLCTCPAKTYRNQDFIIRFLKGLDECFSVVRSQLFLLDPLPPVNRVFAMVNEQDTVADAALVSPAKDAARIPPGSVLILTEQGTRWTCAMESTGIQLDTRDTLDDRVLVIMLLPPSTAPLPPLLTLLCSPAAPHRHPLHTAWFKKNKLLGHQLNQFLD 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02932 661 Pfam Queuine tRNA-ribosyltransferase 109 220 IPR002616 GO:0006400|GO:0016763
Aip08g02932 661 Pfam Queuine tRNA-ribosyltransferase 220 320 IPR002616 GO:0006400|GO:0016763
Aip08g02932 661 Gene3D - 221 322 IPR036511 GO:0006400|GO:0016763
Aip08g02932 661 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 112 219 IPR002616 GO:0006400|GO:0016763
Aip08g02932 661 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 221 320 IPR002616 GO:0006400|GO:0016763
Aip08g02932 661 Pfam Retrotransposon gag protein 428 528 IPR005162 -
Aip08g02932 661 Gene3D Peptidase S8/S53 domain 323 397 IPR036852 GO:0004252|GO:0006508
Aip08g02932 661 Gene3D - 96 220 IPR036511 GO:0006400|GO:0016763
Aip08g02932 661 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 107 219 - -
Aip08g02932 661 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 220 320 - -
Aip08g02932 661 SUPERFAMILY tRNA-guanine transglycosylase 98 320 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02932 Aip-Chr8 117636908 117650282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02932 310 397 Subtilisin-like Serine Gene Family AT2G05920 50.000 6.74e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02932 K00777 - gmx:100819664 392.889