Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02915 ATGGCAGTGGAGTTAATGGGATTCCCAAAAATGGACGACCCAAATAACAAAGCCATACAAGAAGCAGCATCCGAGGGCATAAAGGGAATGGAGCACCTCGTTCGCCTTCTTTCAAACCCTTCGCAAAACGACACCACTGACCTCACAAACGTCACCGTTTCCAAGTTCCGCAAACTCATCTCCTTACTTAACCGCACCGGCCGCGCCCGCTTCCGCCGTGCACCAATTTCAAATTCCTCAGACACTTTATCCTTCTCTCCGGCGACCTTCACTCCTCCCCCGCCGCCGCCGCACTCGCAGCCACAGCCACAGCCACAGCTACAGCCACAGCCGCTTGCGGTTGCTCCGGTCACCGTACACCACCCTTCTCCTCTTCTTCCGCCGCAGACTCTCACTCTTGACTTCACCAAACCTAACAACAGCTTCCTCACCAACGTATCCAACAACGCCGGAGCCAAATCCATGGAGCTGGAGTTCTCGAAGGACACGACGACGTTTAGCGTCTCGTCGAACTCGTCGTTTATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGCTCGGAACCTCGATCTTTCTCAACCCTGCCGGGAAATTGCCTCTCTCGTCGTCGGCGCCGGCTCCGGCTCCGGTCAAGAAAAGGTGTCACGACCACCACTCCGACGATGTATCCGGCAAGGTCTCCGGTTCTTCCAGCAAGTGCCACTGCATCAAGCGAAGGAAAAATAGGGTTAAGAAGACGATAAGAGTGCCGGCAATTAGTTCAAAGATAGCTGATATTCCGGCGGACGAGTACTCATGGAGGAAGTACGGTCAGAAACCGATCAAAGGGTCGCCGTACCCAAGGGGTTATTATAAGTGCAGTACTGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGCGCACCAGATGATCCATCTATGCTGATCGTGACGTACGAAGGGGAGCACCGTCACTCCATTCAGACCGCGATGCAGGATAACATTTCTTCTGCGGGAGTGGGTTTGGTATTCGGGTCAACGTAA 1035 0.5498 MAVELMGFPKMDDPNNKAIQEAASEGIKGMEHLVRLLSNPSQNDTTDLTNVTVSKFRKLISLLNRTGRARFRRAPISNSSDTLSFSPATFTPPPPPPHSQPQPQPQLQPQPLAVAPVTVHHPSPLLPPQTLTLDFTKPNNSFLTNVSNNAGAKSMELEFSKDTTTFSVSSNSSFMSSAITGDGSVSNGKLGTSIFLNPAGKLPLSSSAPAPAPVKKRCHDHHSDDVSGKVSGSSSKCHCIKRRKNRVKKTIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPSMLIVTYEGEHRHSIQTAMQDNISSAGVGLVFGST 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02915 344 MobiDBLite consensus disorder prediction 206 229 - -
Aip08g02915 344 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g02915 344 PANTHER WRKY PROTEIN 15 337 - -
Aip08g02915 344 SUPERFAMILY WRKY DNA-binding domain 262 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g02915 344 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g02915 344 MobiDBLite consensus disorder prediction 73 87 - -
Aip08g02915 344 MobiDBLite consensus disorder prediction 73 108 - -
Aip08g02915 344 Pfam Plant zinc cluster domain 215 262 IPR018872 -
Aip08g02915 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 337 IPR044810 GO:0003700
Aip08g02915 344 MobiDBLite consensus disorder prediction 88 108 - -
Aip08g02915 344 Gene3D WRKY domain 249 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g02915 344 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02915 Aip-Chr8 117298106 117300504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02915 1 343 WRKY Transcription Factor Family AT2G24570 53.125 2.48e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip08g02915 WRKY 5.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02915 - - gmx:100127394 391.349