Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02902 ATGGCGTCTTGTGGTTCCAACGGAGTTGAATCCCCAAACACGCTCCAATCCATATGTTACAACCGCGGTTCCCTTCAGCTTCTCGATCAGAGGAAGCTACCTCTGGAAACAATTTTTTTGGACATAAAGGATTCTACTGATGGCTGGAATGCCATACGGGATATGGTGGTCCGGGGAGCACCTGCTATTGCCATTGCAGCCGCACTCTCTCTGGCTGTTGAGGTGTCTAATCTAGGTTCTTTTAATGGGTCGCCTGGTGATGCTGCTTCCTTGTTGCAAAGCAAGTTAGAATATCTTGTCTCAAGTCGGCCAACTGCAGTAAACTTATCAGATGCTGCAACAAAGCTAAAAGAAGTCATATCTAAGGCTGCTGCTACCAGTTCAGAGGCCAGGAGTGTTTTCCAGGCATATATAGAAGCAGCGGAAATTATGCTTGAGGATGATGTTGCCTCGAACAAAGCAATTGGTTCATATGGAGCAAAGTTCATGCAACAGCAAATGGAGAAACAGAAACTTTCTGTCTTGACCCATTGCAACACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTAATTCGCGCACTTCACAGTGGAGGAGTTTTAGAAAGGGCTTATTGCACTGAAACCCGGCCATTTAATCAAGGTGCTAGACTTACTGCCTATGAGTTAGTGCATGATAAAATACCAGCTACTCTTATAGCAGATTCTGCTGCTGCTGCCTTAATGAGAGCCGGACGCGTGGATGCTGTTGTTGTTGGGGCCGATCGTGTTGCATCAAATGGTGACACAGCCAACAAAATTGGGACCTATAGCGTTGCCTTGTGTGCCAAGTTTCACAATGTACCTTTTTATGTGGCTGCACCGCTGACTTCGATTGATCTGTCACTTTCTTCCGGAGAAGAAATTGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACACACGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCAGGAATTTCGGTATGGAATCCGGCTTTCGATGTTACACCTGCTGGTCTAATACATGGAATCATAACTGAGAAGGGTGTCATTACAAAGATGTCTTCGGCTGATGCTTTTGACATAAAAGCATTCATACAGAAAACAGGACCCTCACTGCCTCACGACCTCACTCACTCACTCCTCCTTCCTCTCATCTTGAGCTCCTTCCTCACTCCCTCACTTCTGTCCAGCCACCGCCCTGTTACCACCGCCGTCGCAACTTCTGGAAGCGGCCTTCCCCACTGCCGTCGTCTCCGCCACCAATTGAACTTCGAAGCCACTATCCCGCCGCGCCTCGTGCCTCCATCGCACAGCCACTGTCCCGCCGCGCCTCGTGTCTCCATCGCGCAGCCACTGTCCCGCCGCGCCAGCTCTGTTCCACCGCGCTCCAGTCCTTCAGCGGCTTCAGCTCTGTTCCATCGCGCAGCTCTTCCCTCGAAGAAGCTGTCTGCCGTCGACAGCATCGCCGCCGCATCCGCCGGTCGTCCCTCCTCTTCCTCCACTTCAAATTGGATACTCTCTGTTTCTGTTCCTGTTCGATACTTTCTTTTTTCCCCGGGTTCGTTCCTCTCTTCCGTCTCGTCCCCTCTCTACTTTGAATTTCTCTTATTCTCTCACTCATTTCAGTCACTATGTCTATTTCAAGAGAACTAG 1671 0.4991 MASCGSNGVESPNTLQSICYNRGSLQLLDQRKLPLETIFLDIKDSTDGWNAIRDMVVRGAPAIAIAAALSLAVEVSNLGSFNGSPGDAASLLQSKLEYLVSSRPTAVNLSDAATKLKEVISKAAATSSEARSVFQAYIEAAEIMLEDDVASNKAIGSYGAKFMQQQMEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGARLTAYELVHDKIPATLIADSAAAALMRAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGEEIVIEERSPKELLNTRGGLGEQVAASGISVWNPAFDVTPAGLIHGIITEKGVITKMSSADAFDIKAFIQKTGPSLPHDLTHSLLLPLILSSFLTPSLLSSHRPVTTAVATSGSGLPHCRRLRHQLNFEATIPPRLVPPSHSHCPAAPRVSIAQPLSRRASSVPPRSSPSAASALFHRAALPSKKLSAVDSIAAASAGRPSSSSTSNWILSVSVPVRYFLFSPGSFLSSVSSPLYFEFLLFSHSFQSLCLFQEN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02902 556 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 358 IPR011559 GO:0044249
Aip08g02902 556 Pfam Initiation factor 2 subunit family 57 357 IPR000649 GO:0044237
Aip08g02902 556 Gene3D - 171 369 IPR042529 -
Aip08g02902 556 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 372 - -
Aip08g02902 556 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 358 IPR037171 -
Aip08g02902 556 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 372 - -
Aip08g02902 556 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 16 358 IPR005251 -
Aip08g02902 556 Gene3D - 13 170 IPR027363 -
Aip08g02902 556 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 15 367 IPR005251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02902 Aip-Chr8 117041104 117050596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02902 54 377 Eukaryotic Initiation Factors Gene Family AT2G05830 76.994 8.31e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02902 K08963 - gmx:100799311 575.859