Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02901 ATGAATCTCCCTTCTCTCACTTACTTCCCTCAGAAACTTGTTCCTCCTCTCTGCTCTGCTCTTACCAACTCCACCAGAAGCAGTGGTACTGCTGATAATATTGCTATTGAAGGTTGCAATTTGAAGTTCTCGTTCACAGCAATGAGGCAAGCGAAGGTTGTGCCTGTGCTTAGGGATTGTTCGTTTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCAAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTATTGAATCCAACTTCAGGAATAGTGCATGTGAATGAACCCAAGAGTTTTGTTTTTCAAAATCCTGACCATCAGGTGGTGATGCCAACTGTAGACGCTGATGTTGCATTTGGTCTTGGTAAGTTCAGCTTGACTAATGATGAAGTAAGGTCTAGGGTGTCGAGAGCCTTGCATGCTGTAGGCCTCTCTGACTACGAGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCAATTGCCGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAGGCTGTTAGAAACTCTTTGGATACATCTGCAGAAGTTACAGCATTATGGGTGACCCATCGTTTGGAAGAACTAGAATATGCAGATGGTGCCATATACATGGAGGATGGGAAAGTAACAGGTAAGAAAGGGCAAGAAATTTCGGTTCAAGGTGGAGTAATTGATGATTTGGCAAAGCATTTGATTGAACAATATGGAGTTACAAAAAGATACATTGAAGTTCTTGATAAAACCAAGAAATGA 846 0.4314 MNLPSLTYFPQKLVPPLCSALTNSTRSSGTADNIAIEGCNLKFSFTAMRQAKVVPVLRDCSFRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGIVHVNEPKSFVFQNPDHQVVMPTVDADVAFGLGKFSLTNDEVRSRVSRALHAVGLSDYEKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSLDTSAEVTALWVTHRLEELEYADGAIYMEDGKVTGKKGQEISVQGGVIDDLAKHLIEQYGVTKRYIEVLDKTKK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02901 281 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 265 - -
Aip08g02901 281 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Aip08g02901 281 Gene3D - 23 265 IPR027417 -
Aip08g02901 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 241 IPR027417 -
Aip08g02901 281 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524
Aip08g02901 281 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 262 IPR003439 GO:0005524
Aip08g02901 281 CDD ABC_cobalt_CbiO_domain1 43 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
Aip08g02901 281 SMART AAA_5 66 239 IPR003593 -
Aip08g02901 281 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02901 Aip-Chr8 117036408 117039546 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02901 36 241 Calmodulin-binding Proteins AT2G36910 28.634 9.93e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02901 - - gmx:100813654 380.563