LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g02883	ATGAATTTTCAATTTTCTAGCATCAACCAGATTCAGGGGCATTTCAGAGAAGAGAAGCAGTTAGGGTTTTCAGACAACTGCAATCCCTGCCATTCTCATACCCTTCCTCTGCTGCAAATTTCCGCGACCTACTTCCGCCGACGCGCCACGCCTCCGCCGCCGCCGCACCCTGCCTCCGCCTCGCCCTGCTTCGGCCGCCGCGCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCATCTGGTTCATCAGATATCTGAGGTTGTCAATACTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGCCAATCAATTGAAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCCATGCTTTAGCTCTTTGTTATTACGGAGCAGGGAAGAACGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAGATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTTCACTTTCTGCATACTCGAAATTGGCCATTTCTGATGCTGAGAGGGTTAAGAGACAATCTGAGGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTACACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTGCAATTGGTAA	867	0.4602	MNFQFSSINQIQGHFREEKQLGFSDNCNPCHSHTLPLLQISATYFRRRATPPPPPHPASASPCFGRRATPPTLNKTRGFCGPKSLIWFIRYLRLSILNSMKDLIDICREHKIGAIANQLKELLPGTIHRKERFHALALCYYGAGKNVEALDLLRKLLSNREDPRHVPSLLMASKICCENFSVTKDPGVSFARMALENLDGRCNQLENMANFLLGVSLSAYSKLAISDAERVKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDATLHYAKCIVKLEVGCNW	288

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g02883	288	Gene3D	Tetratricopeptide repeat domain	107	284	IPR011990	GO:0005515
	Aip08g02883	288	PANTHER	TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED	111	287	-	-
	Aip08g02883	288	PANTHER	PROTEIN NPG1	111	287	IPR043376	-
	Aip08g02883	288	MobiDBLite	consensus disorder prediction	48	67	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g02883	Aip-Chr8	116803836	116806160	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip08g02883	112	282	Calmodulin-binding Proteins	AT4G28600	46.784	1.93e-43	155

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g02883	K21843		-	aip:107611481	350.132