Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02882 ATGGATGGATCGTTTGTGCCTAGAAACAACATTGAAGAGGCTATACTTCTTTTAATGATTTTGCTTAGAAAAGTCACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTATCTGTTTCTGGAGATTTGATGATTTTAGCCAATCAATTGGAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCCATGCTTTAGCTCTTTGTTATTACGGAGCAGGGAAGAACGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAGATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTTCACTTTCTGCATACTCGAAATTTGCAATTTCTGATGCTGAGAGGGTTAAGAGACAATCTGAGGCACTTCATACCCTTGAAAATGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATATGCTGAGCAACGGAAGTTGGATGCTGCACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGGGTATTATCCGCACAAAAGCGGTTCTTAGATGCCGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGAGTAACACGGAACAAAAACCATGTTTCATTCGGCGAGTGTTCAACAAGAACATGGTCTTGTCCATGATTTTGTATCCCATATTGGTCGATTTGCCTTTAATTCCAAGTTCTTCACCTTTGGCTCTGATAATTGCGCTTTAG 1062 0.3992 MDGSFVPRNNIEEAILLLMILLRKVTLNRIEWDPSILDHLSFALSVSGDLMILANQLEELLPGTIHRKERFHALALCYYGAGKNVEALDLLRKLLSNREDPRHVPSLLMASKICCENFSVTKDPGVSFARMALENLDGRCNQLENMANFLLGVSLSAYSKFAISDAERVKRQSEALHTLENACKLSRMEDPVVLYHLSLEYAEQRKLDAALHYAKCIVKLEVGSNVKGWLLLSRVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVHSKSFGSRNKLFKSNTEQKPCFIRRVFNKNMVLSMILYPILVDLPLIPSSSPLALIIAL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02882 353 Gene3D Tetratricopeptide repeat domain 8 312 IPR011990 GO:0005515
Aip08g02882 353 PANTHER PROTEIN NPG1 1 311 IPR043376 -
Aip08g02882 353 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 311 - -
Aip08g02882 353 SUPERFAMILY TPR-like 169 311 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02882 Aip-Chr8 116802419 116803792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02882 2 307 Calmodulin-binding Proteins AT4G28600 57.516 9.18e-104 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02882 K21843 - gmx:100800762 471.085