Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02874 ATGGCCAAAACACGTTCCAATTCCCTGCTTCAAACTCTACTTGTCTTCTTCGTAATCACTCCTATAATCACTGCTATTCCAGATTGTAAAAATTCAAGTAATGCCCTCTCTCCTCTATCCACACAATCTTCATCTCCATGGACTTCACCATCCAAAGATTTTGCATTCGGTTTTCAATCTGTTCAATTCAAGGATCCACGCTATGTCCCTCTGCTCTCCATCTACTTCACCAAATCACCCAACAAGACCATTGTTTGGTACGCGAAACCCAACCGGGAAATCCCGGTTAGGTCCTCCATCAATATCACAAACAATGGTCTCGTCATATATAACCCCAAAGGAAGTGAAATTTGGTCCCGTCCAGAAAAGAAGGACAAAATGGTAACTTGTGCTTCTATGCTAGATACTGGAAACTTTGTTCTTAAAGACAAAGACGGTAATATAGTTTGGGAGAGTTTTGAAGAACCAAGCGACACGCTTCTCCCCGGTCAGAATTTTTCCAAGTCTCAGCCATTCAATTTGCAAGCTCGTCAATCGGAAACAAATTTCTCAACTAACAATAACTTCAATCTCAGCTGGCAAGGCGATGGCAATTTGGTACTTTACTATTCTCAAAATCACAAAGAAGATGAACAGGCGCAGATTCATGCATACTGGGCAGCCGGAACTGACGGTCGCGGATCGCGTTTATTCTTCGACGAGTTCGGACGGATTTACGTTAAGGATGATAATGACACTGAGCTGTTCCAAGTAACAAACGGGAACCCAGGTTCAACTCAATATTTTTACATGGCGAGATTTGAATCTGATGGAGTCTTCAGGCTGTACAATTACCAGAAGACTAAAACGGTTACAAACGAGGAGGATAACTGTTCTTCTGGATGGAGAGTGTTGGAACAAGAACCCGATGATATATGTGTTCATAGCATAGCTCAGAATGAAAATTTTATCTGTGGGCCTAACAGTTATTGTGTTTCCATAAATGGAAAGCCTCAATGCACGTGTCCGGATAATTATTCCTATTTTGTGCAGCCTAATGATCCAAACAACTTAACAAGTTGTAGGCCGGATTTTCCGCCTCCCAGCTGTCTGGTCGACGGCTGGGAGATGGATCCGGCCAAGGTGGATTTCCAAGAACGGCAGAATTTGAACTGGCCTTTCTCCGATTACGAGTTGGTGAGCGGTGATTTCGATAAGTACACGTGTCGGGAAAGGTGCGGTGGCGATTGCTTCTGTGCTGCGGCTGTATACTACGTTGATAACAACAAAGTGGCAAATTGTTGGAAGAAGAAGTACCCTTTGAGTAATGGAAGGTATAGTACGAAAGCCGAAAATGGAACAATAGTGTTCCTCAAGTTTCGCAAGGCAGGGAATGGAAACCAACATCGATCTTATTTAACACTTATTTTGTCGTTTCTTCTTGGGAGCTCGGTTTTCCTCAACATTCTGTTGGTGTTGGGAATTCTTGGAATTTACATGTTCTTGCGCAAGAGAAAGATGTTAGGGCAGCCACTAGTTGCGAGCTTGGCGCCGGAGACGGTTAGAAGCTACACATACAAAGAGCTTGAGAAGGCGACACGTGGATTCAAACAGAAATTGGGTCAAGGTGCTTTTGGAACTGTGTATAAAGGGGTATTAGAATTAGGGTCTAATACGAAAAGATATGTAGCTATTAAGAAGTTAGATAAGGTGGTTGAAGAAGGTGAAAATGAATTCAAAACAGAGGTGAGTGTGATAGGCCAAACCCACCACAGGAACTTGGTTCGGTTGCTTGGTTACTGCGACGAAGGGGAGCATCGTCTTCTTGTGTATGAGTACATGAGCAATGGTTCATTGGCGAGCTTTCTTTTTGGGATTTCTAGGCCTCATTGGAATCAAAGAGTGCAAATTGGATTGGGAATAGCTAAAGGAGTCACATATTTGCATGAAGAGTGTAACACCCAATTCATTCATTGCGATATCAAGCCTCACAACATTCTTCTGGACGACGTATTCGCGCCCAGGATATCCGATTTTGGGCTGGCAAAGCTGTTGCTGGCAGAGCAAACTCGCGCCACTAGGACGCACGCGAGAGGGACTATTGGATACTTTGCACCTGAATGGTTTACAAAAGCTTCAATCACAAGCAAAGTCGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAGCTCATATGCTGCAAATCCAGTATTGTGTTTTCAATGTCAAATGATGAAGAACAAGCGCTTATAGATTGGGCATATGATTGTTACAAACATGGGAAATTGGTTCAATTTGTTGAGAATGATGAGGAGGCAAAGAATGATATTAGGAGGGTGGAAAAACATGTTATGGTAGCAATTTGGTGTGTTCAAGATGATCCTTCACTAAGGCCTTCTATGAAGAAGGTTGCTCAAATGCTTGAGGATGTTATTGCTGTACCTTTGCCACCTCGACCTTCCATGTTTTGTTCATCATCTGCAACTTCGTTAAGTAGTGTTTCTTTTTGA 2487 0.429 MAKTRSNSLLQTLLVFFVITPIITAIPDCKNSSNALSPLSTQSSSPWTSPSKDFAFGFQSVQFKDPRYVPLLSIYFTKSPNKTIVWYAKPNREIPVRSSINITNNGLVIYNPKGSEIWSRPEKKDKMVTCASMLDTGNFVLKDKDGNIVWESFEEPSDTLLPGQNFSKSQPFNLQARQSETNFSTNNNFNLSWQGDGNLVLYYSQNHKEDEQAQIHAYWAAGTDGRGSRLFFDEFGRIYVKDDNDTELFQVTNGNPGSTQYFYMARFESDGVFRLYNYQKTKTVTNEEDNCSSGWRVLEQEPDDICVHSIAQNENFICGPNSYCVSINGKPQCTCPDNYSYFVQPNDPNNLTSCRPDFPPPSCLVDGWEMDPAKVDFQERQNLNWPFSDYELVSGDFDKYTCRERCGGDCFCAAAVYYVDNNKVANCWKKKYPLSNGRYSTKAENGTIVFLKFRKAGNGNQHRSYLTLILSFLLGSSVFLNILLVLGILGIYMFLRKRKMLGQPLVASLAPETVRSYTYKELEKATRGFKQKLGQGAFGTVYKGVLELGSNTKRYVAIKKLDKVVEEGENEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEYMSNGSLASFLFGISRPHWNQRVQIGLGIAKGVTYLHEECNTQFIHCDIKPHNILLDDVFAPRISDFGLAKLLLAEQTRATRTHARGTIGYFAPEWFTKASITSKVDVYSFGVVLLELICCKSSIVFSMSNDEEQALIDWAYDCYKHGKLVQFVENDEEAKNDIRRVEKHVMVAIWCVQDDPSLRPSMKKVAQMLEDVIAVPLPPRPSMFCSSSATSLSSVSF 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02874 828 Pfam D-mannose binding lectin 83 170 IPR001480 -
Aip08g02874 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 277 IPR036426 -
Aip08g02874 828 CDD STKc_IRAK 533 801 - -
Aip08g02874 828 SUPERFAMILY Protein kinase-like (PK-like) 510 800 IPR011009 -
Aip08g02874 828 SMART serkin_6 527 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02874 828 ProSiteProfiles Protein kinase domain profile. 527 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02874 828 Gene3D Phosphorylase Kinase; domain 1 494 606 - -
Aip08g02874 828 Gene3D Transferase(Phosphotransferase) domain 1 607 806 - -
Aip08g02874 828 CDD B_lectin 33 156 IPR001480 -
Aip08g02874 828 Gene3D - 34 153 IPR036426 -
Aip08g02874 828 SMART blect_4 38 156 IPR001480 -
Aip08g02874 828 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 822 - -
Aip08g02874 828 Pfam Protein tyrosine and serine/threonine kinase 529 800 IPR001245 GO:0004672|GO:0006468
Aip08g02874 828 Gene3D - 155 287 IPR036426 -
Aip08g02874 828 ProSitePatterns Protein kinases ATP-binding region signature. 533 560 IPR017441 GO:0005524
Aip08g02874 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 205 IPR036426 -
Aip08g02874 828 PIRSF SRK 4 827 IPR024171 GO:0004674
Aip08g02874 828 PANTHER - 9 822 - -
Aip08g02874 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Aip08g02874 828 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02874 Aip-Chr8 116644677 116647163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02874 514 801 Receptor kinase-like Gene Family AT1G60800 42.712 2.80e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip08g02874 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02874 - - ahf:112707732 1509.58