Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02859 ATGATAGAGATGATCCGTGAATCGTCTCACCAAGATGAGACAGCGAACGAGTTTAACGCCGTTAAGGGAGTGTGTATTACATTTACACTCAACCACTCCACTAAATACACAGGCAGCAGAATCATTATAACAAGAAGGGATACTGATGTGGTAGACAAGCATGTGATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTGTTGGCATGCTTTCAACAGCAAGGAGCCTGCAGAGAACTTTGAAAATGTTTCAAGAAATGCAATAAGTTATGCAAAGGGCTTTCCACTTGCTTTAGAAGTAATAGGCTCCCATTTAGGGGAAACTTACTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGAGTATGTTAAAAGGGTATTGAAAGCTTGCGACTTCTATCCAGTTCTTCGAGTGTTCATTAGTAAATGTCTTGTCACTGTAAATCAAAATGGCTGCTTGGAAATGCATGATCTAGTGCAAGACATGGGCAAGGAGATTGTAATGAGCGAGTCGCCAACAAACCCGGGTGAACGTAGCAGATTATGGTCTCCCAAGGACATTCTTCAAGTACTCAAAGATGACACAGAAGTGTTGATCCTGTGCTTGTGTTTTATCGGGAAGTAG 663 0.4148 MIEMIRESSHQDETANEFNAVKGVCITFTLNHSTKYTGSRIIITRRDTDVVDKHVMGDVVTKKYKMEELNDDDSLELFCWHAFNSKEPAENFENVSRNAISYAKGFPLALEVIGSHLGETYLDIACFFKGEKWEYVKRVLKACDFYPVLRVFISKCLVTVNQNGCLEMHDLVQDMGKEIVMSESPTNPGERSRLWSPKDILQVLKDDTEVLILCLCFIGK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02859 220 Gene3D - 68 155 IPR042197 -
Aip08g02859 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 142 IPR027417 -
Aip08g02859 220 SUPERFAMILY "Winged helix" DNA-binding domain 119 205 IPR036390 -
Aip08g02859 220 Pfam NB-ARC domain 35 118 IPR002182 GO:0043531
Aip08g02859 220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 114 IPR044974 GO:0006952
Aip08g02859 220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 121 211 IPR044974 GO:0006952
Aip08g02859 220 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 38 114 - -
Aip08g02859 220 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 121 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02859 Aip-Chr8 116527808 116529201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02859 39 206 WRKY Transcription Factor Family AT5G45050 31.100 2.80e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02859 - - adu:107472636 319.701