Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02858 ATGAACGCAATCGAGAATTGCAAAATGGCAATAGTGGTGCTGTGCGAGAACTACGCATCTTCGACGTGGTGCCTTGATGAGTTGGTCAAGATCGTTGACTGTCACGAAAAGCAAGGGAAGCAGGTTCTGCCAATTATTTACAGAATGAAACCTTCAGATGTGTGGGAACAGAAGGGTTCCTATGAAACAGCCATGGCTAAACATGAGGATAGATATGGAAAAGACTCTGAGAAGGTCAAAGCATGGCGATTAGCTTTGTCCAAAGTAGACACGCTAAAGCTAATAAAATGGCTGCATTGCACGGAGATCACGTATGAACCGGAGTTTATCAAGAATATTGTTAGAGACACCGCTGACAGATTACCGTTGCCTGAACCAACCCAGCATGTAGTTGGACTCGATACTTGCTGTGAACAAGTAAAATCAGTACTAAATATTGAGTCTAATGAAAATATTTGCATGTTGGGAATTTATGGACCTGGTGGAATAGGCAAAACCACATTGGCCAGATGTCTATTCGACAAGATCAAGCGGCAGTTTGAAGCTTCATGTTTTCTCGGTAATGTCAGAGAAAAATCTGAAAGTCGCGGAAGCTTGGAAAGTCTGCAAAAGACAGTTTTATATGACATGGGTGAGGAGACAATAACTGACCTTGGCAGTGAATTTAAGGGAGGATATGAAAtcaaacggaggcttcgccacaaaagagtacttctagttcttgatgatgttaattcaataacacaattggaatcactggctggagggcatgattggtttggttcaggcagcagaatcattataACAACAAGGGATACTGATGTGGTAGACAAGCATGTGATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTCTTGGCATGCTTTCAACAGGAAGGAGCCTGCAGAGAACTTTAAAAATGTTTCAAGGAATGCAATAAGTTATGCAAAGGGCTTTCCGCTGGCTTTAGAAGTAATAGGCTCCCACTTAGGGGGTTTTACAAGTGTGGATAGCTGGGAAGAGGAACTGCACAAGTATAGAATTGATCCAAGTATTCAAGGAGTACTTGAAATAAGCTACAATAGCTTGTATGAACTTGATCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGATTATGTTAAAAGGGTACTGAAAGCTTGTGACTTCTATCCAATTGTTCGAGTGTTCATTAGTAAATGTTTAATCACTGTAAATCAGAGTGGTTGCTTGGATATGCATGATCTAGTACAAGACATGGGCAAAGAGATTGTAATGAATGAGTCGCCAACAAACCCGGGTGAACGCAGCAGATTATGGTCTCATAAAGACATTCTTCAAGTACTCAAAGATGACACAGGAAGTAGCTCAATTGAAGGAATAATGCTTCACCCTTCTACACTTGAAGAAGTAAATTATTGGATTAATACTGCCTTTGACAAGATGGAGAAACTCAGAATTCTAATTGTTCGGAATACAGTATTTTCAACAGCACCAAGTCATCTTCCAAATAGTTTACGACTACTAGAGTGGAAAGGGTATCCATCAGAGTCATTCCCACTAGATTTTCATCCCCACAGAATTGTTGATCTCAAGCTACCTCACAGTGCTCTTAAATTGGAAAGGCTATTTCAGGTATTTGAGGATTTGACATTTATCAACCTCTCCCAATGTCAATCCGTTACACACGTCCCGGATATGTCTGGAGCTAAAAGCCTGAGAGTCCTCACACTTGACAAATGCAATAAACTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTGTATTTGAGTGCTTCGGAATGCAGTAAGCTCAAACATTTTGTACCAGAAATGTATTTGCCGTCTCTCGAAGTGCTTTCATTTTACTTTTGTAAAAGCCTCCAAAGCTTCCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGTAAATTCTGCAATCGAGGAGTTCCCAAATTCCATTGGTAATCTTACAGGGCTCGAGCATATAGACATCTCTAAATCCAAAAGACTCCAGTACCTACCAGATGAAGATCTTCATCCAATTCTTCATATTCATCAGAAGTTGGAAGGCATCAATGTATCAAATAATTGTTTTTCATCCCTCCCAAAATGCATTGAAGGATTTTTGCACTTGAAAATTCTTGACGTGAGTTATTGTAATAATCTTATGATAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCACAGTCCTCAACCATGCCATTGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACAATTGCAGCAAAGATATTCCTCTGTTTTGGGCTCGGCGAAAGTTTCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGAGCCACTGGCAGTGATATTGATGAGACATTGATGAAGGCTCTAGACTTCTGGCCTCAAATTGCTTCATCCAAATCCTACACTGTTGGTCTCAACTTGTTTATAGAAGGCCAACAAATATTTCCGGAGAAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTTGATCTTCGAACTTTGTTCAGTGACAAAGAGTGGCATGATCTTGATTCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACTCTGAATCATTGGGGAGTTTATGTTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATCTTCCCAACCACAAATTGTCAAGCGAGTTAGTTCTAGAAAGAAGTCCGCAACAAACTCGGCAAAGAATTGGACAAGTGATAGATAATTTGAATCCAACAGAAACATTTGACAATGAGCATTTGTCTCTTGTTGATCTAGAAGAAGATAGAATGAGCTTTACAAAGGCATTGGTGAGGTCGTACAAGATGGCCAAGGCTAACGAAGCTTCTTCGTCTTCTAACTATGGGGCAAGTTTGAAGAAAGAATCAGAAGAATCTAATTGGGACGTGTTGCGGTTAATAGAGTTGATGAAGGAGAATGTGCCAAAAGATATTGCTGATTCAAACCCTGGTCAAATACAAGCTGTACAAGAATTCGCAGAAGAGTTTTTTAAGGCACGTGCACAATTTATGATGGAGAAAGACTGCGACATGTTGAATATTGGTATGATGATTGCTTTAGAGGAATACCATATTTTTGGACCTCCAACTCGTCGTTATTGGGGAAGAATAGATTTAAAACATGCAGATGATCCAACATTCAAAGCAGTGATGAGGAGGGCATTCCAAGAATCATGGAGAATTGAAGAACGCGCCAAAGCACACAATAGAAGGATGATTCCCATTCTTCTATTGAAATGCGAGATTCCATCCATATGGGGAGAATCATCGCAGAAGGAAGAATACGGTGATGATCCTGTGTTGGAAGAATTATTGAGCAAGATAGAGAAAGATGCTATGGACTGTAATAAATCATATGGTAAATTGAAGGCATCTATTACTTATACTAATGAACTACTAGCAGTTTCTGATGAATATTTGCTAGAAGCAACGTATCTCAGAGCACATGAAAATATGGAAAATGAAGTCATGTCAGAATGGGGAAGGTTAGAATTGGCATTATGTGACATGTTCAGATCAAGAATGCGAAGATCATTGTTTGGTTGGAGAAAGGGGCTCATGATTCCTGGAGCTAGTACTAAGAAGACCTCTTATGGGACAATTAGAGTGGCACTCGAAGATCAAGACACTCATGATAATAATCGAATGCAGCATAATAAGCTGTGGCGGATCCAGATTCCAAGGTACCTCTTTTTGGAAATTTGGTCTGTGGTACTTGGGATGGTCTAA 3933 0.3819 MNAIENCKMAIVVLCENYASSTWCLDELVKIVDCHEKQGKQVLPIIYRMKPSDVWEQKGSYETAMAKHEDRYGKDSEKVKAWRLALSKVDTLKLIKWLHCTEITYEPEFIKNIVRDTADRLPLPEPTQHVVGLDTCCEQVKSVLNIESNENICMLGIYGPGGIGKTTLARCLFDKIKRQFEASCFLGNVREKSESRGSLESLQKTVLYDMGEETITDLGSEFKGGYEIKRRLRHKRVLLVLDDVNSITQLESLAGGHDWFGSGSRIIITTRDTDVVDKHVMGDVVTKKYKMEELNDDDSLELFSWHAFNRKEPAENFKNVSRNAISYAKGFPLALEVIGSHLGGFTSVDSWEEELHKYRIDPSIQGVLEISYNSLYELDQKTFLDIACFFKGEKWDYVKRVLKACDFYPIVRVFISKCLITVNQSGCLDMHDLVQDMGKEIVMNESPTNPGERSRLWSHKDILQVLKDDTGSSSIEGIMLHPSTLEEVNYWINTAFDKMEKLRILIVRNTVFSTAPSHLPNSLRLLEWKGYPSESFPLDFHPHRIVDLKLPHSALKLERLFQVFEDLTFINLSQCQSVTHVPDMSGAKSLRVLTLDKCNKLVGFDESIGFMPNLVYLSASECSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLVNSAIEEFPNSIGNLTGLEHIDISKSKRLQYLPDEDLHPILHIHQKLEGINVSNNCFSSLPKCIEGFLHLKILDVSYCNNLMIIPELPSSIQKVDARYCLSLTPQSSTMPLSKILQETKRIEVVMPKKEIPNWLDYNCSKDIPLFWARRKFPVVALAFMFGRATGSDIDETLMKALDFWPQIASSKSYTVGLNLFIEGQQIFPEKSKYFNVGEDHVLLFDLRTLFSDKEWHDLDSYIGDDWKAIHVVCESTLTLNHWGVYVYKGETNMDDIYFKHLPNHKLSSELVLERSPQQTRQRIGQVIDNLNPTETFDNEHLSLVDLEEDRMSFTKALVRSYKMAKANEASSSSNYGASLKKESEESNWDVLRLIELMKENVPKDIADSNPGQIQAVQEFAEEFFKARAQFMMEKDCDMLNIGMMIALEEYHIFGPPTRRYWGRIDLKHADDPTFKAVMRRAFQESWRIEERAKAHNRRMIPILLLKCEIPSIWGESSQKEEYGDDPVLEELLSKIEKDAMDCNKSYGKLKASITYTNELLAVSDEYLLEATYLRAHENMENEVMSEWGRLELALCDMFRSRMRRSLFGWRKGLMIPGASTKKTSYGTIRVALEDQDTHDNNRMQHNKLWRIQIPRYLFLEIWSVVLGMV 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02858 1310 Pfam TIR domain 2 117 IPR000157 GO:0007165
Aip08g02858 1310 SUPERFAMILY "Winged helix" DNA-binding domain 364 467 IPR036390 -
Aip08g02858 1310 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 89 IPR035897 -
Aip08g02858 1310 SMART till_3 1 92 IPR000157 GO:0007165
Aip08g02858 1310 CDD AAA 138 274 - -
Aip08g02858 1310 SUPERFAMILY L domain-like 487 773 - -
Aip08g02858 1310 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 697 - -
Aip08g02858 1310 Gene3D - 118 283 IPR027417 -
Aip08g02858 1310 Gene3D - 293 376 IPR042197 -
Aip08g02858 1310 Gene3D Ribonuclease Inhibitor 473 663 IPR032675 -
Aip08g02858 1310 Gene3D Ribonuclease Inhibitor 664 789 IPR032675 -
Aip08g02858 1310 PRINTS Disease resistance protein signature 231 245 - -
Aip08g02858 1310 PRINTS Disease resistance protein signature 731 747 - -
Aip08g02858 1310 PRINTS Disease resistance protein signature 154 169 - -
Aip08g02858 1310 PRINTS Disease resistance protein signature 328 342 - -
Aip08g02858 1310 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 704 936 - -
Aip08g02858 1310 Pfam NB-ARC domain 136 357 IPR002182 GO:0043531
Aip08g02858 1310 Gene3D - 1 117 IPR035897 -
Aip08g02858 1310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 697 IPR044974 GO:0006952
Aip08g02858 1310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 704 936 IPR044974 GO:0006952
Aip08g02858 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 386 IPR027417 -
Aip08g02858 1310 ProSiteProfiles TIR domain profile. 1 121 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02858 Aip-Chr8 116521778 116527729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02858 1 762 WRKY Transcription Factor Family AT4G12020 30.982 1.72e-79 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02858 - - aip:107611494 2607.02