Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02854 ATGGCGGCAAatgatgtattcctgagttttagaggagggacgcgctaccgattctcggatcatctctatggtgctttgcggcgaaatggaatcgacacgttcagagataatgaaaatctgagggtaggggatgaactggaacctattctcatgaaggcaatcgaaaattgcgaaatggcagtagtggtgctgtgtgagaactacgcatcttcgacatggtgccttcgtgaactagtcaagatcattgactgtcacgaaaagcaagggaagcaggttctgccaattatttacagagtgaatccttcaaatgtgtgggatcagaagggttcctatgaaacagccatggctaaacatgaGAGCAGAGAAGACCCTGAGAAAGTCAAAGCATGGCGATTAGCTTTGTCCAAAGTGGAAAAGCTAGGATGGATGCGCTGCACGGAGGACTTGCATGAACCGGAGTTTATCAAGGTTATTGTTAGAGACACCGCTGGAAGATTACCGTTGCCTGAACCAACTGATCATGTAGTTGGATTGGATACTCGCTGTGAAGAAGTAAAATCACGGCTAGATATTGAATCTAATGAAAATGTTTGCATGTTGGGAATTTATGGGCCTGGTGGAATAGGCAAAACCACATTGGCCAAATGTCTATTCGACAAGATCAAGCGGCAGTTCGAAGCTTCATGTTTTCTAGCCAATGTCAGAGAAAAATCTGAAAGTCGTGAAAGTTTAGAAAGTCTGCAAAAGACACTTTTAGATGACATGGGTGAGGAGACAATAACTGAGTTTGGAAGTGAATTTAAGGGAGGatctgaaatcaaacgaaggcttcgccacaaaagagtacttctagttcttgatgatgttaattcaataacgcaactggaatcactggctggagggcatgattggtttggttcaggcagcagaatcattataACAACAAGGGATACTGATGTGATAGACAAGCATGTGATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTCTTGGCATGCTTTTAACAGCAAAGAGCCTGCAGAGAACTTTGAAAATGTTTCAAGAAATGCAATAAGTTATGCAAAGGGCTTTCCACTGGCTTTAGAAGTAATAGGCTCCCATTTAGGGGGTTTTACAAGTGTGGATAGCTGGGAAGAGGAACTGCAAAAGTATAGAATTGATCCAAGTATTCAAGGAGTTCTTGAAAGAAGCTACGATAGCTTGTATGAACTTGACCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGAGTATGTTAAAAGGGTGTTGAAAGCTTGCGACTTCTACCCAGTTGTTCGAGTTTTCATTAGTAAATGTCTCGTCACTGTAAATCAAAATGGTTGCTTGGAAATGCATGATCTAGTGCAAGACATGGGCAAGGAGATTGTAATGAGTGACTCACCAACAAACCCTGGTGAACATAGTAGATTATGGTCTCATAAAGACATTCTTCAGGTTCTCAAAGATGACACAGGGAGTAGTTCAATTGAGGGAATAATGCTTCACCCCGCTACCCATGAAGAAGTAGATCATTGGATTACTACTGCTTTTGACAAGATGGAGAACCTTAGAATTCTAATTGTTCGGAATACAATATTTTCAACAGCGCCAAGTTGTCTTCCAAATAGTTTGCGACTATTGGAGTGGAAAGGATATCCATCAGAGTCATTCCCACTTGATTTTCATCCCAACAGAATTGTTGACCTCAAGCTACCTCACAGTGCTCTTAAATTGGAAAAGTCATTTCAGATATTTGAGGATTTGACATTTATCAATCTCTCCCAGTGTCAGTCCATTACACTAATTCCCAATGTGTCTGGAGCAAAAAGCTTGAGAGTCTTCACACTAGACAGATGCCATAAGTTGGTAAAGTTTGATGAATCTGTTGGGTTTCTGCCAAATCTTGTGTACTTAAGTGCCTCAGAATGCAGGGTGCTTCGTAGTTTTGTGCCAAGAATGTATTTGCCATCTCTCGAAGTGCTTTCATTTTACTTTTGTAAGAAACTTCAGAACTTCCCAGATGTCATGCAAAAGATGGATAAGCCCTTAAAGATTTACTTGGCAAATACTGCTATCAAAGAGTTCCCAGATTCCATTGGTAATCTTATAGGGCTTGAGCATATAGACATTTCAATATGCAGAGGACTCAAAGATCTACCAAGTAGCTTCTTCAAGTTGCCGAAACTTTTCACATTAACCGTTGAGGGATGTTATCATCTTAGAAGATCATTTAAGAGGTTCAAAGAGAGCCATTCCACATTAGATGACTGCCCAAATATAAAGAGACTGAACTTCACTGGTGCCAATCTATCAGATGAAGATCTTCATCCAACTATTCAGGTTCTTCAAAAGTTGGAAGACGTCAATGTATCACACAATGATTTTGTATCCCTCCCAAATTGCATCCAACGATCTTTGCACATAAAATGTCTTGATGTGAGTTATTGTAAGAATCTTAAGACAATTCCAGAACTGCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCTTATCCTTAACTTCAGAGTCCTCAACCGAACTGTGGTCTAAGGTCTTACTAGAGACCGAAAGAATTCAAATTGTGATGCCAAAAAAGGAGATTCCCAATTTGTTTGACTGCGATTCCAGTGAAGGTATTCCTCTGTTTTGGGCTCGCGGAAAATTCCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGATCCACTGTGAGAAACAGTGTTGCTGAGACAAGGACTGACATCCTGGGTTTCTTCCCTCAAATTGGTTCATCCATGTCCGCCATTGTTCGCCTTCACTTGTTCATAGGTGGCAAACAAATATTTCCGAAGGATTCCAAGTATTTCAGTGTTGGGGAAGATCACGTGCTACTTTTTGATCTACGAGCTTTGTTCAGTGACGAAGAGTGGCATGGTCTTGATGCGTATCTTGGAGTTGGAGACGATGGTTGGAAAGCCATTCAGGTTCAATGCGAATCACCATTAACTCTCAGCCATTGGGGTGTGTATGTGTATAAGCAAGACACAAACTCGGTTGATATTCAATTCAAGAATCCCAATCCGAATCCCAATCCCAAATCTCCGTTATCCGACTTGGTTCCAAAAAGAAGTCCGCATGAACCCCAGGAAAGTATGATGAGACAAGTGGCAGAAAATTTGAATCCAAGAGAATTACTTGGTGACTATTTGCCTCTTGTGGAGTTAACAGAAGTTCCCTCTTTTACATCGGCATTGCTGAGATCGTTGAGGACTGGTAAGGCTGAAACAACAAGGCCGGAATCTTCGGCCTATGGTGCAAGCTTAAAGCAGGAACATGAAGAATCTAATTGGAATGTTTCGAGGGTGATGGACCTGATAAAGGATGATGTGCCTAGACATATTGCTGATGCATACTCTAATGAAATACGAGAAGCACGGCGATTTGTAGAAGAACTGATGAGGGCACGCATGGAATTGTTGAAGGAAAAGGGCCAAGAGAGGATGGATATTGATATGGCAATCGTTTTAGAGCAACCGCGTTCTGGAAAACCTCCGTGCCGTCGTTATTGGGGAAGGCTGCACATAAAGCATGAAGAGATAACCGCCAAAGCAATTTTGAGGAAGACAACGCAACTAGCATGGGGATTTTGGAATCCCGGCAGAACAACGATAAAAGAGAAGGCAACCGCTGTTGTGTTGAAATGCCATGCTAGAGAGGAAGCTTCAACCTCTACGGGCCAAGGGGAATCGTCAGAAGAAGAAAATAATGATCCTGTGTTGGAAGAATTATTAAGCCAGATAGAGGAAGATGCTATGCGCTTCAATACGTCATATGGGAAGATGAAGGCATGTATTATCTTAACTGACGATGCTGATGATCTCATTTCTGAAGAATATACAGCAGAATTCATGCTTATCAGAGGAAAAGAAAATGCGGAAATGAGAGGGATGTCGCAATGGGGAGGGTTTGAATTGTTGCTATATGAAATGATGAGAGCATCAGGAACAAATATGTTTGGATCCGTAGAGTCCGAACCTCGCTTCGAGAAGACATCTTACGGGAAAATAAGGGTGGAGAACTAA 4131 0.3658 MAANDVFLSFRGGTRYRFSDHLYGALRRNGIDTFRDNENLRVGDELEPILMKAIENCEMAVVVLCENYASSTWCLRELVKIIDCHEKQGKQVLPIIYRVNPSNVWDQKGSYETAMAKHESREDPEKVKAWRLALSKVEKLGWMRCTEDLHEPEFIKVIVRDTAGRLPLPEPTDHVVGLDTRCEEVKSRLDIESNENVCMLGIYGPGGIGKTTLAKCLFDKIKRQFEASCFLANVREKSESRESLESLQKTLLDDMGEETITEFGSEFKGGSEIKRRLRHKRVLLVLDDVNSITQLESLAGGHDWFGSGSRIIITTRDTDVIDKHVMGDVVTKKYKMEELNDDDSLELFSWHAFNSKEPAENFENVSRNAISYAKGFPLALEVIGSHLGGFTSVDSWEEELQKYRIDPSIQGVLERSYDSLYELDQKTFLDIACFFKGEKWEYVKRVLKACDFYPVVRVFISKCLVTVNQNGCLEMHDLVQDMGKEIVMSDSPTNPGEHSRLWSHKDILQVLKDDTGSSSIEGIMLHPATHEEVDHWITTAFDKMENLRILIVRNTIFSTAPSCLPNSLRLLEWKGYPSESFPLDFHPNRIVDLKLPHSALKLEKSFQIFEDLTFINLSQCQSITLIPNVSGAKSLRVFTLDRCHKLVKFDESVGFLPNLVYLSASECRVLRSFVPRMYLPSLEVLSFYFCKKLQNFPDVMQKMDKPLKIYLANTAIKEFPDSIGNLIGLEHIDISICRGLKDLPSSFFKLPKLFTLTVEGCYHLRRSFKRFKESHSTLDDCPNIKRLNFTGANLSDEDLHPTIQVLQKLEDVNVSHNDFVSLPNCIQRSLHIKCLDVSYCKNLKTIPELPSSIQKVDARYCLSLTSESSTELWSKVLLETERIQIVMPKKEIPNLFDCDSSEGIPLFWARGKFPVVALAFMFGRSTVRNSVAETRTDILGFFPQIGSSMSAIVRLHLFIGGKQIFPKDSKYFSVGEDHVLLFDLRALFSDEEWHGLDAYLGVGDDGWKAIQVQCESPLTLSHWGVYVYKQDTNSVDIQFKNPNPNPNPKSPLSDLVPKRSPHEPQESMMRQVAENLNPRELLGDYLPLVELTEVPSFTSALLRSLRTGKAETTRPESSAYGASLKQEHEESNWNVSRVMDLIKDDVPRHIADAYSNEIREARRFVEELMRARMELLKEKGQERMDIDMAIVLEQPRSGKPPCRRYWGRLHIKHEEITAKAILRKTTQLAWGFWNPGRTTIKEKATAVVLKCHAREEASTSTGQGESSEEENNDPVLEELLSQIEEDAMRFNTSYGKMKACIILTDDADDLISEEYTAEFMLIRGKENAEMRGMSQWGGFELLLYEMMRASGTNMFGSVESEPRFEKTSYGKIRVEN 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02854 1376 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 138 IPR035897 -
Aip08g02854 1376 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1087 IPR044974 GO:0006952
Aip08g02854 1376 MobiDBLite consensus disorder prediction 1255 1274 - -
Aip08g02854 1376 SMART till_3 3 140 IPR000157 GO:0007165
Aip08g02854 1376 MobiDBLite consensus disorder prediction 1038 1067 - -
Aip08g02854 1376 ProSiteProfiles TIR domain profile. 2 166 IPR000157 GO:0007165
Aip08g02854 1376 SUPERFAMILY "Winged helix" DNA-binding domain 409 512 IPR036390 -
Aip08g02854 1376 SUPERFAMILY L domain-like 526 909 - -
Aip08g02854 1376 Gene3D - 2 163 IPR035897 -
Aip08g02854 1376 Gene3D Ribonuclease Inhibitor 709 905 IPR032675 -
Aip08g02854 1376 Gene3D Ribonuclease Inhibitor 531 708 IPR032675 -
Aip08g02854 1376 Gene3D - 164 328 IPR027417 -
Aip08g02854 1376 Gene3D - 338 421 IPR042197 -
Aip08g02854 1376 PRINTS Disease resistance protein signature 199 214 - -
Aip08g02854 1376 PRINTS Disease resistance protein signature 276 290 - -
Aip08g02854 1376 PRINTS Disease resistance protein signature 373 387 - -
Aip08g02854 1376 PRINTS Disease resistance protein signature 677 693 - -
Aip08g02854 1376 MobiDBLite consensus disorder prediction 1107 1127 - -
Aip08g02854 1376 Pfam NB-ARC domain 180 404 IPR002182 GO:0043531
Aip08g02854 1376 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1087 - -
Aip08g02854 1376 CDD AAA 183 319 - -
Aip08g02854 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 431 IPR027417 -
Aip08g02854 1376 Coils Coil 1151 1178 - -
Aip08g02854 1376 Pfam TIR domain 5 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02854 Aip-Chr8 116434093 116441795 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02854 18 772 WRKY Transcription Factor Family AT4G12020 31.425 7.73e-84 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02854 - - adu:107472636 2305.41