Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02837 ATGGACAAGGGACCACCACCTGCCCTCTTTGTTAATGATGGTTCATTCATGGAGAAGTTCAAGCAACTCCAGCAAGAGCAGGAGAAGGAGAAGAATAACAAACTATCCGAGCCTAAACCAATTAAAGTTGTTTCAGGATCTTTGGCTCCTAAAACCTCCATTAGTAGGGTTAATGATACACGGAAAACTTCTCAGGCTGGTTCCAGTGGCAAACTTGCTTTCAGTCTAAAACAAAAGTCAAAGCTGGTTCCACCGCCTGTTAAGTTAGCTGATGATGAAGAAGAAGAAACAGATGCTGGGGATTTTTCAAATGCTGTACAGGCAAAACGCCAAAAAGTTGATCAGGAGGATGGCACTGCACAGCCATCAAGGCAATTTGATGTTGCACCCCCAACCCCAAGTGATCCAATGGTGAAGAAAGTTGCTGACAAATTAGCAAGTTTTGTGGCTAAAAATGGAAGACAATTTGAGGACGTTACACGCCAAAAGAATCCTGGGGATACCCCTTTCAAATTTTTATTTGATCCAAGATGTTCTGACTATAAATATTATGAATATCAACTTGCTCAAGAGGAAAAGGCCCTTGCACAGTCCAGGGAACCACAAGCAAATCATAATGGAGGTACAGGCAGTTCATCGTCTAGACCAACAAATGGCTCTCAGAGATCATCTCAGCAGCATTCAACCTACCAAATCCCTGCTTCTGCTTTATATGAAAATGAGCCTAGTGGATCATCAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAAAGCTGCACATGAAGAGAAGTTGCGACAACCTAAGCAGTCAAAGGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCTTCTAATAAAAAAGGCCATCATATGGGTGATTACATTCCGCAAGAAGAGCTTGAGAAGTTCTTGGCTAGCTGTAATGATGCAGCTGCACAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCAAAAATCCAGGCTGATAATGTGGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGTGGTTCCAGGAAGGGTATTGCAGATCCTATAATGGCAGGCAATGTTAAGAAAGATAACTTGGGAGTAGGTGCTATCCAACCTGGGGAGGTGACTCCGGACGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGCCATAGACCCAATCCTCTGAACAATCCTCGGAAGGCTTATTATTGA 1239 0.4374 MDKGPPPALFVNDGSFMEKFKQLQQEQEKEKNNKLSEPKPIKVVSGSLAPKTSISRVNDTRKTSQAGSSGKLAFSLKQKSKLVPPPVKLADDEEEETDAGDFSNAVQAKRQKVDQEDGTAQPSRQFDVAPPTPSDPMVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDPRCSDYKYYEYQLAQEEKALAQSREPQANHNGGTGSSSSRPTNGSQRSSQQHSTYQIPASALYENEPSGSSNADSLALMEFYMKKAAHEEKLRQPKQSKDEMPPPASLQASNKKGHHMGDYIPQEELEKFLASCNDAAAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKDNLGVGAIQPGEVTPDDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02837 412 MobiDBLite consensus disorder prediction 22 37 - -
Aip08g02837 412 Coils Coil 17 37 - -
Aip08g02837 412 MobiDBLite consensus disorder prediction 193 246 - -
Aip08g02837 412 Pfam G-patch domain 330 373 IPR000467 GO:0003676
Aip08g02837 412 MobiDBLite consensus disorder prediction 151 174 - -
Aip08g02837 412 ProSiteProfiles G-patch domain profile. 329 376 IPR000467 GO:0003676
Aip08g02837 412 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Aip08g02837 412 MobiDBLite consensus disorder prediction 22 138 - -
Aip08g02837 412 Gene3D Surp module 125 198 IPR035967 GO:0003723|GO:0006396
Aip08g02837 412 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 412 IPR040169 -
Aip08g02837 412 SMART G-patch_5 327 374 IPR000467 GO:0003676
Aip08g02837 412 MobiDBLite consensus disorder prediction 48 75 - -
Aip08g02837 412 MobiDBLite consensus disorder prediction 197 246 - -
Aip08g02837 412 SUPERFAMILY Surp module (SWAP domain) 117 192 IPR035967 GO:0003723|GO:0006396
Aip08g02837 412 Pfam Surp module 140 189 IPR000061 GO:0003723|GO:0006396
Aip08g02837 412 MobiDBLite consensus disorder prediction 264 292 - -
Aip08g02837 412 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Aip08g02837 412 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 412 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02837 318 372 C2H2 Transcription Factor Family AT5G26610 45.455 7.12e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02837 K13096 - gmx:100813337 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02837 08 116139636 116143126 Aip08g02837 08 116139636 116143126 ECH