Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02816 ATGGTTAGCGTTAGTGTTAGTGGCGGTGGCGGTGCGGTGCGTGTTCTCCTCAGATCACTCGCTAAGCTTCGTGTGCAAGCTAATCTTGTTGTCATTGCTTCCATTGATGATGTTCCTCGCAGATGGATTCGAATTTTGCCATTTCTTCCTATAAAGTCGGGTAGCCACTCTCTCATTTCTAAGGTTAAAAAAAAACTCCTTTCTCTATTCAAATACACACTCATTCCCTTCACACTCGCTCCTCATTTCAATTACTCTCACTTACACTCTCCTATTTTCTTTTTTTCAAGGATAGTCACCATGGTCAATCCAAACCCAACTCTTGAAAAGTTTGCAAGGCATCTCCATCTCCATTCTGCTCTTTCCTCCGACATCCAAAGCAACGATGGATCCTTCCGCCGCCCTGCTTTAAACCAAAGGCGAACATTCTCGAATTACTCGAATCCTGCCTTGCACATGCCAGCATCATGCAAATCCACAACTGATTTCTTTACCGTTACAAGTGCCACAACGTCTCCTGTCTTTGTGGCAGCTCCGGCAGAGAAGGGCAACTTCTTTATTGACTTCATGATGGGCGGAGTGTCGGCAGCCGTGTCGAAAACGGCGGCGGCTCCGATCGAACGAGTGAAGCTTTTGATCCAAAATCAAGATGAGATGATTAAACAAGGAAGACTTGCTCAGCCATACAAGGGTATTGGTGACTGCTTTAGTCGAACAATTGCTGATGAGGGTGTGGTGTCTCTTTGGAGAGGTAACACTGCAAATGTGATTCGCTATTTCCCGACTCAGGCTCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGAGACGGTTACTGGAAATGGTTTGCTGGAAACTTGGCATCAGGAGGTGCAGCTGGAGCCTCATCGCTCTTCTTTGTATACTCTCTTGACTACGCCCGTACTCGTCTTGCTAATGACGCCAAGGCTGCTAAGAAGGGTGGCGGCGACAGGCAGTTTAACGGTCTCGTCGACGTCTACAAGAAGACCTTGGCTTCCGACGGCATCGCCGGTCTTTACCGTGGTTTCAACATTTCCTGCGTCGGTATCATCGTCTATCGCGGTCTCTACTTTGGAATGTATGATTCTCTCAAGCCAGTTCTCTTGACTGGATCTTTGCAGGATAGCTTTTTTGCGAGCTTTGCTCTCGGGTGGCTGATCACCAATGGTGCTGGGCTTGCATCATACCCAATTGACACAGTGAGGAGAAGAATGATGATGACCTCTGGTACAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTACACAAATCCTCCAGAATGAGGGTGCCAAGTCCTTGTTCAAGGGTGCTGGTGCTAACATCCTTCGCGCCATCGCCGGCGCCGGTGTGCTTGCTGGCTATGACAAGTTGCAGGTTATTATGTTTGGCAAGAAGTATGGATCTGGCGGTGCTTAG 1461 0.4771 MVSVSVSGGGGAVRVLLRSLAKLRVQANLVVIASIDDVPRRWIRILPFLPIKSGSHSLISKVKKKLLSLFKYTLIPFTLAPHFNYSHLHSPIFFFSRIVTMVNPNPTLEKFARHLHLHSALSSDIQSNDGSFRRPALNQRRTFSNYSNPALHMPASCKSTTDFFTVTSATTSPVFVAAPAEKGNFFIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLAQPYKGIGDCFSRTIADEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGDRQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGTAVKYKSSMDAFTQILQNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQVIMFGKKYGSGGA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02816 486 SUPERFAMILY Mitochondrial carrier 183 471 IPR023395 -
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 201 215 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 398 420 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 188 201 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 303 321 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 354 372 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Mitochondrial carrier protein signature 251 271 IPR002067 GO:0055085
Aip08g02816 486 PRINTS Adenine nucleotide translocator signature 262 274 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip08g02816 486 PRINTS Adenine nucleotide translocator signature 288 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip08g02816 486 PRINTS Adenine nucleotide translocator signature 394 410 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip08g02816 486 PRINTS Adenine nucleotide translocator signature 229 250 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip08g02816 486 PRINTS Adenine nucleotide translocator signature 185 197 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip08g02816 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 389 475 IPR018108 -
Aip08g02816 486 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 107 486 - -
Aip08g02816 486 Pfam Mitochondrial carrier protein 390 476 IPR018108 -
Aip08g02816 486 Pfam Mitochondrial carrier protein 184 280 IPR018108 -
Aip08g02816 486 Pfam Mitochondrial carrier protein 287 384 IPR018108 -
Aip08g02816 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 276 IPR018108 -
Aip08g02816 486 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 381 IPR018108 -
Aip08g02816 486 Gene3D Mitochondrial carrier domain 186 482 IPR023395 -
Aip08g02816 486 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 107 486 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02816 Aip-Chr8 115785533 115792813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02816 105 486 Antiporters AT5G13490 79.534 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02816 K05863 - gmx:100789942 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02816 08 115785533 115792813 Aip08g02816 08 115785533 115792813 ECH