Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02812 ATGGAAGAGGTGAATTTTCTTTCAGATTTCATGCCTTTGAAAATGGATCCTAATTTCAACTCCAGTTTCCTCAATGGATTTAGATTCAGCCAAGTTCCCACTATCCCCAATGTAGAGGAACAGTGCCCTGATCCTCAATCTATGGAGCTCAGGATTGATGGCTCCATTAATGGTGAGACAATAGCACATGCTGAGCCATACGTGGGTCAGGAGTTTGATTCGGAAGCAACAGCGCATGCATTTTATAATGCATATGCCACGCGTGTTGGATTTGTCATACGTGTAAGTAAGCTCTCACGGTCAAGGCGTGATGGTTCTGCAATTGGACGTGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCCGATAAGCGTGAAAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCCGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAGCACACACACCCTTTGACACCTGGAAAAGGCAGAAAGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGGTGTGCAGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATTGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTACGCAATGTGAAGGAGATTGAAGCTGAAGAACAACAGCTGTTGAAGGGGCACAGAGCTGAGCTATATGCTGCTCGTGTTGCAAAGTGCTTAGCTGCTCTGGAGGGACGTGATAAGGTTTATGTGGATGACCTGAAAAAAGCTGTAGAACTGGTTATTCTTCCCCAGTCAATTGTTAGTGAGAACCCACCAGAGCAGCAAAATCAGCAGCCTCCCCCTCCACCTCCACCTCCCCAAAACCAAGAAGGCGATGAACAGAATGAAGAGGAAGAACAAGAGGATGAAAATGATAAAGAGAATGAGCAGCAGCAAGAGCAATTACTTGAAGAGTTTATCTTTGATGCTGAAGATGGCTTGGTAGATGAGATGAATTGTCGGGCAAAAAGTTCGTTAGCTCTGGGGGTGGCAATCTCATTCTTCCTGCTCTAA 1116 0.4319 MEEVNFLSDFMPLKMDPNFNSSFLNGFRFSQVPTIPNVEEQCPDPQSMELRIDGSINGETIAHAEPYVGQEFDSEATAHAFYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRKDCIYEQYPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVRNVKEIEAEEQQLLKGHRAELYAARVAKCLAALEGRDKVYVDDLKKAVELVILPQSIVSENPPEQQNQQPPPPPPPPQNQEGDEQNEEEEQEDENDKENEQQQEQLLEEFIFDAEDGLVDEMNCRAKSSLALGVAISFFLL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02812 371 MobiDBLite consensus disorder prediction 295 310 - -
Aip08g02812 371 Gene3D - 221 302 - -
Aip08g02812 371 Pfam AAA lid domain 245 298 IPR041628 -
Aip08g02812 371 Coils Coil 311 338 - -
Aip08g02812 371 Coils Coil 219 239 - -
Aip08g02812 371 MobiDBLite consensus disorder prediction 312 329 - -
Aip08g02812 371 Pfam FAR1 DNA-binding domain 81 167 IPR004330 -
Aip08g02812 371 Coils Coil 187 207 - -
Aip08g02812 371 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 243 - -
Aip08g02812 371 MobiDBLite consensus disorder prediction 290 338 - -
Aip08g02812 371 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 38 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02812 Aip-Chr8 115713142 115717117 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02812 FAR1 1.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02812 - - pper:18788777 335.109