Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02796 ATGTCTGACAGAGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCACGGATGGAGTCGGACAAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTTTCCGGTTTAATTTCACAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACGGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGACTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGTGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCTGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACTAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTACATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCCGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTTAATGAAAGGGAAGGCTCCGGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGTGATCGAGCAGGTTTTTTCGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGAGAAAGTTCTTTGCCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCACGCTGTGATATGA 1470 0.5068 MSDRAEHGVGSFEGEGSARMESDKYDFQEDETEHDHHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYAVDSVESIGWIDFLNLSEEDVFRFNFTDVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNGQKRPRAETRCGCPARMLLRMDDESGRWLVAYFSDAHNHHVLELRLSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVLYTTRDMHNVNAKQLREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVTFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTLMKGKAPVSIITDGDRQMKSVIEQVFSEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRRKFFAGFRTTSRCEGLHAVI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02796 489 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Aip08g02796 489 MobiDBLite consensus disorder prediction 1 57 - -
Aip08g02796 489 PANTHER OS02G0262500 PROTEIN 93 487 - -
Aip08g02796 489 MobiDBLite consensus disorder prediction 17 44 - -
Aip08g02796 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 487 IPR031052 GO:0006355
Aip08g02796 489 Pfam MULE transposase domain 313 407 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02796 Aip-Chr8 115370366 115371835 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02796 MULE 1.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02796 - - ahf:112770447 983.786