Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02794 ATGCCGGTGCCCTTCTCCAACGCTGTCAGGGAGAACATGAGTAACCCCGTCGAGGTAAGCACCACAAATGGTCAGTCGTGGAGCATCTCCTGGGTTGTCGAGGAGGAGCATCCGCATCGAATCGTCTTCATCGGAGGGTGGCGAGCCTTTTACGAACACTATCGTCTTCGAATCAGAAACACAATGCTATTTTCGTATCACCAACCAAAGTTTTTCTACATGGCCATCCATGACGCAAGATACTGCGAGATCAACTATGGAAGTCTTCCAGCAATCCCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCCGGTGAACGACCCTGATACACTGATGCTCCCGCTACGGTTCTCGCGGGATTATGGCCGGTCCCTACCGCGACCGCTGACCCTAACCACGCCTACAGGACATCATCATCGCGTGGGCTGGAATATGGAACCTAATGGAAGGATCGTGCTTCATGGAGGATGGGACGCTGTCCGGGAACACTACGGCCTAAGGGATCAGTGGCTGGTGCTGTTCCGTTATCACGAAGCTCAAAACACCATGTATGTCATGTTCTTCAACAGTCATACAATGGAAATCAACTACTTGGCCCATGCCGAGCCGGGGACGGACTCCACTTGTATAAGCTACCCGACGGCCCCCAAGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCCTTCTTTGTTAGTCCAATCGTGCACAGACTGCCAACCCGTTTTCTCCCGAATGTCCCCCCTCTGCCGGGAGTATACGAGGATAGCCCAATTTCGATTACCAACGAGAGGGGCGCGTGGACCGTTCAGTATACGCACTATGTCGGGAGGACGAACGAATGTTTTGGAATGGGCTGGTGTGCCTTAGCAACAACATGTCAACTAAGACACGGCCATGTGTGTGTCTTCGAGCGGCTGGCGCCGCAGGACTACCGGCTGCATATATATTGA 966 0.53 MPVPFSNAVRENMSNPVEVSTTNGQSWSISWVVEEEHPHRIVFIGGWRAFYEHYRLRIRNTMLFSYHQPKFFYMAIHDARYCEINYGSLPAIPAHGNYTVQFFAIIPVNDPDTLMLPLRFSRDYGRSLPRPLTLTTPTGHHHRVGWNMEPNGRIVLHGGWDAVREHYGLRDQWLVLFRYHEAQNTMYVMFFNSHTMEINYLAHAEPGTDSTCISYPTAPKSRHIADGFRSTNPFFVSPIVHRLPTRFLPNVPPLPGVYEDSPISITNERGAWTVQYTHYVGRTNECFGMGWCALATTCQLRHGHVCVFERLAPQDYRLHIY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02794 321 SUPERFAMILY DNA-binding pseudobarrel domain 1 87 IPR015300 -
Aip08g02794 321 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 87 - -
Aip08g02794 321 ProSiteProfiles B3 DNA-binding domain profile. 1 80 IPR003340 GO:0003677
Aip08g02794 321 PANTHER B3 DOMAIN-CONTAINING 95 204 - -
Aip08g02794 321 PANTHER B3 DOMAIN-CONTAINING 2 87 - -
Aip08g02794 321 Gene3D - 218 321 IPR015300 -
Aip08g02794 321 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 95 204 - -
Aip08g02794 321 SUPERFAMILY DNA-binding pseudobarrel domain 105 193 IPR015300 -
Aip08g02794 321 SUPERFAMILY DNA-binding pseudobarrel domain 231 321 IPR015300 -
Aip08g02794 321 CDD B3_DNA 112 192 IPR003340 GO:0003677
Aip08g02794 321 Gene3D - 1 82 IPR015300 -
Aip08g02794 321 Gene3D - 97 195 IPR015300 -
Aip08g02794 321 ProSiteProfiles B3 DNA-binding domain profile. 99 194 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02794 Aip-Chr8 115366834 115368097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02794 114 200 B3 DNA Binding Superfamily AT3G18990 34.483 1.44e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02794 - - ahf:112746889 561.607