Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02793 ATCTCCATGGAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGAACCTCCCACGCGCTACCGACGGCGGGATCCGTTTCATCGGTGGCCACACTAGAGTCACCGTGGATCGTTCCATTTGCTTCTCAGATCCATTTTTTAACTTGTTGGTAAAGGTAGGAGCGTTGTGCGGTTCGTCTGTGACGTTCTGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAATGACGAAGATCTGACGAACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATACCAGAGCCGTGCTGTTTCGGCCAGAATCGTCGAAGAAGGTTTCTCCGGCAACATCGTCTCCGTTGAAGAAGTTGAAGATGGCACTTAACATAATCCGAAATATTTAA 432 0.4954 ISMETSPGRTIKLLCSYGGKNLPRATDGGIRFIGGHTRVTVDRSICFSDPFFNLLVKVGALCGSSVTFWCQLPNEDLETLISLTNDEDLTNISKEYDRASSKLPHPLNTRAVLFRPESSKKVSPATSSPLKKLKMALNIIRNI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02793 143 SUPERFAMILY CAD & PB1 domains 28 122 - -
Aip08g02793 143 Pfam PB1 domain 30 102 IPR000270 GO:0005515
Aip08g02793 143 PANTHER PB1 DOMAIN PROTEIN 8 130 - -
Aip08g02793 143 SMART PB1_new 25 112 IPR000270 GO:0005515
Aip08g02793 143 PANTHER OS05G0427100 PROTEIN-RELATED 8 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02793 Aip-Chr8 115353662 115354179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02793 11 102 MAP Kinase Kinase Kinase AT1G04700 43.011 5.21e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02793 - - aip:107611558 246.899