Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02747 ATGGGGAGTGAAAAGGTTGGAAGTTGTGGAAAATTCATAGAGAGCTCAAAACCGTATTTTGCAATGATGTCATTACAATTTGGATATGCTGGCATGAATGTTATTACTAAGCTTTCTCTTAATCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGCCATGCCTTTGCAGCTGCTAGCATTGCCCCATTTGCTAACAGGCCAGTGATTGATCAAAATTTTTACTATGCTGGGTTGAAGCTTACATCCCCAACCTTTTCATGTGCAATGAGCAACATGCTTCCGGCCATGACTTTCGTTATGGCGGTTATATGCCGGATGGAAAAGATAGACATGAAGAAAGTGAGATGCCAAGCTAAGGTAGTGGGAACATTAGTGACAGTTGCTGGGGCCATGCTGATGACATTATACAAAGGACCTATCATGGAATTGGTATGGGCCAAACATAGAGAAACTCATCACAACAACACCAATTCTTCATCATCAACAACCTCCAAAGGTTCCTCTGAAAAAGATTGGTTCTTAGGATGCACTTTCCTCATCATTGCTACCCTTGCCTGGGCTTCCCTCTTTGTTCTACAAGTAAGACCTATACAAACGTACAAGAATCATCAACTAAGCCTAACATCACTTATCTGCTTCATAGGAACTCTTCAAGCTACTGCAGTTACTTTTGTTATGGAACACAATCCTTCTGTTTGGAGAATTGGCTGGGACATGAACTTACTTGCTGCAGCATATGCTGGGATTGTGACATCAAGTATATCATACTATGTACAAGGGTTGGTAATTAAGAAGAAGGGACCTGTCTTTGCAACTGCCTTTAGCCCTCTTATGATGATCATTGTTGCCATCATGGGCTCCTTCATCCTTGCTGAGCAAATTTATCTTGGAGGTGTGGTTGGTTCGATCTTGATTGTAATAGGCTTATACTCTGTTCTATGGGGAAAGCACAAAGAACAAATAGAAACCAAAATGGGACATCATGATGATAATGATATACATTTGCCTGTTACAAAAGTTAGTGCTCAAAATTTTGGAAATGAAGACTCAAAAAATGATGCCACAGTAGATCATTGCACCCAAGAAAACTTTGGTCACAAAGAAGAAGTCAACAAGGAGAAGCACTCCTCTTCGGTTGTAATAGGCATGACTAACCAAGAGACAAATTAA 1173 0.4049 MGSEKVGSCGKFIESSKPYFAMMSLQFGYAGMNVITKLSLNQGMSHYVLVVYRHAFAAASIAPFANRPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVICRMEKIDMKKVRCQAKVVGTLVTVAGAMLMTLYKGPIMELVWAKHRETHHNNTNSSSSTTSKGSSEKDWFLGCTFLIIATLAWASLFVLQVRPIQTYKNHQLSLTSLICFIGTLQATAVTFVMEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVVGSILIVIGLYSVLWGKHKEQIETKMGHHDDNDIHLPVTKVSAQNFGNEDSKNDATVDHCTQENFGHKEEVNKEKHSSSVVIGMTNQETN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02747 390 PANTHER WAT1-RELATED PROTEIN 12 65 - -
Aip08g02747 390 MobiDBLite consensus disorder prediction 363 390 - -
Aip08g02747 390 Pfam EamA-like transporter family 175 314 IPR000620 GO:0016020|GO:0016021
Aip08g02747 390 PANTHER WAT1-RELATED PROTEIN 12 65 IPR030184 GO:0016021|GO:0022857
Aip08g02747 390 PANTHER WAT1-RELATED PROTEIN 68 350 IPR030184 GO:0016021|GO:0022857
Aip08g02747 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
Aip08g02747 390 PANTHER WAT1-RELATED PROTEIN 68 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02747 Aip-Chr8 114279878 114283254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02747 1 390 Nodulin-like Gene Family AT5G07050 59.135 7.82e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02747 - - gmx:100804390 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02747 08 114279878 114283254 Aip08g02747 08 114279878 114283254 ECH