Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02743 ATGTGGAGAGAAGCTTTCATGAAGGCGTATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACCATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTAAAACCTGATTTGCCAAAGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTTACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAAGTGGTTGAGATAGTATCCACGGCACTAACTCGAGCATCAACAGCAAGGGTTCTAGTGGATTCTGCAGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATTTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAATCCGATAATGGTCAAACGGCCGAGCCTTCTTTGCAAAGGAACTTCACTTCCACCTTGGAGCCAACGTCGAGCTCGCGGGTGAGGGGGAGACACAGCGCCGCCGACTTCGCCAGCCTTTCGCCGTCGAATCCTCCTTGCCGTCGCCGTTCGAATCGCGACCTGGAGAGGGAGGAGATGCGAGCCATGGCCGGAGGGGAGAAGACGCCGTGTCTGGAAGCCGCCGTCGTCCTCGCAGGGTCAGCCGCTGTCATGTATGGCAGAGCCAGAAGAAGAGAGTTCGGGAGCAGAACAGGCGAGAGAGATCTGAGGCTGGGTTGGGAGTCCAACCACCGCGTCCAGCCGCCGTttgtgtcgccggcgctgccttcgccggagctgccaccgtcaaaaagggattcatgccgccgcaggtgtcgctgccggagaagggagctgcatctctgtgactccggccgccgggagtggttccgtgacttctgggaccgccgccgaagcctctggctgtttctgccgtcaccggagaatcctgccgtcgccggagtctga 1254 0.4219 MWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPKEAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSYRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSTALTRASTARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVEFDCDEQCYSSATIQSNHSGNPVESDNGQTAEPSLQRNFTSTLEPTSSSRVRGRHSAADFASLSPSNPPCRRRSNRDLEREEMRAMAGGEKTPCLEAAVVLAGSAAVMYGRARRREFGSRTGERDLRLGWESNHRVQPPFVSPALPSPELPPSKRDSCRRRCRCRRRELHLCDSGRREWFRDFWDRRRSLWLFLPSPENPAVAGV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02743 417 ProSiteProfiles PPM-type phosphatase domain profile. 1 206 IPR001932 -
Aip08g02743 417 SUPERFAMILY PP2C-like 2 208 IPR036457 -
Aip08g02743 417 CDD PP2Cc 1 206 IPR001932 -
Aip08g02743 417 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 2 255 - -
Aip08g02743 417 MobiDBLite consensus disorder prediction 227 265 - -
Aip08g02743 417 MobiDBLite consensus disorder prediction 227 299 - -
Aip08g02743 417 Pfam Protein phosphatase 2C 4 183 IPR001932 -
Aip08g02743 417 Gene3D - 1 212 IPR036457 -
Aip08g02743 417 SMART PP2C_4 1 204 IPR001932 -
Aip08g02743 417 MobiDBLite consensus disorder prediction 284 299 - -
Aip08g02743 417 PANTHER ALPHABET, ISOFORM E-RELATED 2 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02743 Aip-Chr8 114197749 114206854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02743 1 252 PP2C-type Phosphatase Gene Family AT1G03590 79.447 1.11e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02743 - - aip:107612736 500.745