Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02741 ATGACAATGCCGACGCTCGCTGATTTCTGCTTCTTCAGATTCATAATCCCCAACACAGATAATCAACTTGTAAGTTTTCAGTTGTTTTTGTTCTACTACCCTATCCCCAGGACCCGCATGCAAGCCCACATCAATATCGATTTCTTACTCGTGCAGAGAATGCCGGTGCCCTTCTTCAACGCTGTCCGGGAGAACATGAGCAACCCCATCAAGGTAAGCACCACAAATGGTCAATCGTGGAGCATCTCCTGGGTTGTCGAGGAGGAGCATCCGCATCGAATCGTCTTCACCGGAGGGTCGAGCCTTTTACGAACACTACCATCTTTGAATCGAAACTTGCGTAACGGAAGTCTTCCAGCAATCCCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCTGGTGAACGACCCTGATACACTGATGCTCTCGCTACGGTTCTCGCGGGATTATGGCCGGTCCCTACCGCGACCCCTGACCCTAACCACGCCTACAGGACATCATCATCGCATGGGCTGGAATATGGAACCTAATGGAAGGATCCTGCTTCGTGGAGGATGGGACGCTGTCCGGGAACACTACGGCCTAAGGGATCAGTGGCTGGTGCTGTTCCGTTATCACGATGCTCAAAACACCATGTATGTCATGTTCTTCAACGGTCATACAATGGAAATCAACTACTTGGCCCATGCCGAGCCGGGGACGGACTCCACTTGTATAAGCTATCCGACGGCCCCCAAGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCCTTCTTTGTCAGCCCAATCGTGCACAGACTGCCAACCCGTTTTCTCCCGAATGTCCCCCCTCTGCCGGGAGTATACGAGGATAGCCCAATTTCGATTACAAACGAGAGGGGCGCGTGGACCGTTCAGTATACGCACTATGTCGGGAGGACGGACGGATGTTTTGGAATGGGCTGGTGTTCCTTAGCAACAGCATGTCAACTAAGACACGACCATGTGTGTGTCTTCGAGCGGCGCGGCTGCATATATATTGAGAACTCCTGTATCCTAAACCCCCCAGCCACCTTGCCTCAGTTTGTCAAATACAATGATGCAACCTGCATGTCCATACATCTGTATCTTTAA 1128 0.5133 MTMPTLADFCFFRFIIPNTDNQLVSFQLFLFYYPIPRTRMQAHINIDFLLVQRMPVPFFNAVRENMSNPIKVSTTNGQSWSISWVVEEEHPHRIVFTGGSSLLRTLPSLNRNLRNGSLPAIPAHGNYTVQFFAIILVNDPDTLMLSLRFSRDYGRSLPRPLTLTTPTGHHHRMGWNMEPNGRILLRGGWDAVREHYGLRDQWLVLFRYHDAQNTMYVMFFNGHTMEINYLAHAEPGTDSTCISYPTAPKSRHIADGFRSTNPFFVSPIVHRLPTRFLPNVPPLPGVYEDSPISITNERGAWTVQYTHYVGRTDGCFGMGWCSLATACQLRHDHVCVFERRGCIYIENSCILNPPATLPQFVKYNDATCMSIHLYL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02741 375 CDD B3_DNA 131 221 IPR003340 GO:0003677
Aip08g02741 375 PANTHER B3 DOMAIN-CONTAINING 124 233 - -
Aip08g02741 375 Gene3D - 247 349 IPR015300 -
Aip08g02741 375 Gene3D - 125 223 IPR015300 -
Aip08g02741 375 SUPERFAMILY DNA-binding pseudobarrel domain 132 221 IPR015300 -
Aip08g02741 375 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 124 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02741 Aip-Chr8 114177218 114178710 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02741 128 225 REM Transcription Factor Family AT4G33280 26.531 3.56e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02741 - K21415 ahf:112746889 480.715